Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

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© 2014 - All rights reserved. Exploring and Mapping Autoimmune Disease Using Data and Digital Tools- Bibliography Bio-IT World Conference and Expo Cambridge Healthtech Institute

Transcript of Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

Page 1: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

© 2014 - All rights reserved.

Exploring and Mapping Autoimmune Disease Using

Data and Digital Tools-Bibliography

Bio-IT World Conference and ExpoCambridge Healthtech Institute

Page 2: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

© 2014 - All rights reserved.

Sources• Gut as an Immune Organ

• Campbell, Andrew. "Autoimmunity and the Gut." Autoimmune Diseases (2014): n. pag. Web. 8 Mar. 2015. http://www.hindawi.com/journals/ad/2014/152428/

• Kamada, Nobuhiko, Sang-Uk Seo, Grace Chen, and Gabriel Nüñez. "Role of the Gut Microbiota in Immunity and Inflammatory Disease." Nature Reviews: Immunology 13 (2013): 321-35. Web. 8 Mar. 2015. http://www.researchgate.net/publication/236337970_Role_of_the_gut_microbiota_in_immunity_and_inflammatory_disease

• Sorini, Chiara, Marika Falcone. "Shaping the (auto)immune Response in the Gut: The Role of Intestinal Immune Regulation in the Prevention of Type 1 Diabetes." American Journal of Clinical Experimental Immunology (2013): 156-71. Web. 8 Mar. 2015. <http://www.researchgate.net/publication/251876845_Shaping_the_(auto)immune_response_in_the_gut_the_role_of_intestinal_immune_regulation_in_the_prevention_of_type_1_diabetes>.

Page 3: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

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Sources• Gut-Brain Axis

• Mayer, Emeran, Rob Knight, Sarkis Mazmanian, John Cryan, and Kirsten Tillisch. "Gut Microbes and the Brain: Paradigm Shift in Neuroscience." The Journal of Neuroscience34.46 (2014): 15490-5496. Web. 8 Mar. 2015. http://www.painresearchforum.org/papers/47412-gut-microbes-and-brain-paradigm-shift-neuroscience

• Foster, Jane, and Karen-Anne Neufeld. "Gut-Brain Axis: How the Microbiome Influences Anxiety and Depression." Cell 36.5 (2013): 305-38. Web. 8 Mar. 2015. http://www.researchgate.net/publication/235404335_Gut-brain_axis_how_the_microbiome_influences_anxiety_and_depression

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Sources• The Microbiome

• Waldor, Matthew, Gene Tyson, and Elhanan Borenstein. "Where Next for MicrobiomeResearch?" Public Library of Science Biology (2015): n. pag. Web. 8 Mar. 2015. http://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.1002050

• Brüssow, Harald. "Microbiota and the Human Nature: Know Thyself." Environmental Microbiology (2014): n. pag. Web. 8 Mar. 2015. http://www.bionity.com/en/publications/757948/microbiota-and-the-human-nature-know-thyself.html

Page 5: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

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Sources• The Microbiome

• Sonnenburg, Erica, and Justin Sonnenburg. "Starving Our Microbial Self: The Deleterious Consequences of a Diet Deficient in Microbiota-Accessible Carbohydrates." Cell Metabolism Perspective (n.d.): 779-86. Web. 8 Mar. 2015. http://www.researchgate.net/publication/265055722_Starving_our_Microbial_Self_The_Deleterious_Consequences_of_a_Diet_Deficient_in_Microbiota-Accessible_Carbohydrates

• Kostic, Aleksandar, Ramnik Xavier, and Dirk Gevers. "The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead." Gastroenterology: The Gut Microbiome and Disease (n.d.): 1489-499. Web. 8 Mar. 2015. http://www.gastrojournal.org/article/S0016-5085(14)00220-0/abstract

Page 6: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

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Sources• Mapping Immune Repertoire

• Robinson, William. "Sequencing the Functional Antibody Repertoire--diagnostic and Therapeutic Discovery." Nature Reviews: Rheumatology (2014): 1-11. Web. 8 Mar. 2015. <http://www.bioportfolio.com/news/article/2177455/Sequencing-the-functional-antibody-repertoire-diagnostic-and-therapeutic-discovery.html>.

• Robins, Harlan. "Immunosequencing: Applications of Immune Repertoire Deep Sequencing." ScienceDirect (2013): 646-52. Web. 8 Mar. 2015. http://www.researchgate.net/publication/258059445_Immunosequencing_applications_of_immune_repertoire_deep_sequencing

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Sources• Causes of Autoimmune Disease

• Kim, Ho-Youn, Hae-Rim Kim, and Sang-Heon Lee. "Advances in Systems Biologyproachesfor Autoimmune Diseases." Immune Network 2 (2014): 73-80. PubMed Central. Web. 5 Mar. 2015. http://europepmc.org/abstract/pmc/pmc4022781

• Brodin, Petter, Vladimir Jojic, and Tianxiang Gao. "Variation in the Human Immune System Is Largely Driven by Non-Heritable Influences." Cell 160.1-2 (2015): 37-47. Science Direct. Web. 5 Mar. 2015. http://www.researchgate.net/publication/271534046_Variation_in_the_human_immune_system_is_largely_driven_by_non-heritable_influences

• Farth, Kyle, and Alexander Marson. "Genetic and Epigenetic Fine Mapping of Causal Autoimmune Disease Variants." Nature 518 (2014): 337-43. Nature. Web. 5 Mar. 2015. https://www.broadinstitute.org/publications/broad6179

Page 8: Exploring and Mapping Autoimmune Disease Using Data and Digital Tools - Sources

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Sources• Causes of Autoimmune Disease

• Romanoski, Caset, Christopher Glass, and Hendrick Stunnenberg. "Epigenomics: Roadmap for Regulation." Nature 518 (2015): 314-16. Nature. Web. 5 Mar. 2015. http://europepmc.org/abstract/med/25693562

• Rojas-Villarraga, Adriana, Jenny Amaya-Amaya, and Alberto Rodriguez-Rodriguez. "Introducing Polyautoimmunity: Secondary Autoimmune Diseases No Longer Exist." Autoimmune Diseases 2012 (2012): n. pag. Web. 5 Mar. 2015. http://www.oalib.com/paper/32037

• Mowat, Allan, and William Agace. "Regional Specialization Within the Intestinal Immune System." Nature Reviews Immunology 14 (2014): 667-85. Nature. Web. 5 Mar. 2015. http://www.pubfacts.com/detail/25234148/Regional-specialization-within-the-intestinal-immune-system