Evolution lectures1&2 September 2013

151
SBC174/SBS110: Evolution (& Ecology)

description

Queen Mary U London SBC174/SBS110 Evolution lectures from September 23rd, 2013

Transcript of Evolution lectures1&2 September 2013

Page 1: Evolution lectures1&2 September 2013

SBC174/SBS110: Evolution (& Ecology)

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Taking notes...

Being a student...

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Course Outlineand Timetable

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Yannick Wurm

YW

Andrea Hatlen

AH

Dave Hone

DH

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http://qmplus.qmul.ac.uk/course/view.php?id=3972Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo Darwinism

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of Evolution

Semester A: Evolution

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Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and Molecules

Semester A: Evolution

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Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution

Semester A: Evolution

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Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual Selection

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon)

Semester A: Evolution

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene Selection

Semester A: Evolution

In Jean Smith’s Timetable; not yet on “SMART”

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, Speciation

Semester A: Evolution

In Jean Smith’s Timetable; not yet on “SMART”

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Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, SpeciationWeek 11: DH – Evolution of Parasites, Antibiotics

Semester A: Evolution

In Jean Smith’s Timetable; not yet on “SMART”

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http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, SpeciationWeek 11: DH – Evolution of Parasites, AntibioticsWeek 12: DH – Convergence, Revision Session

Semester A: Evolution

In Jean Smith’s Timetable; not yet on “SMART”

Page 19: Evolution lectures1&2 September 2013

http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, SpeciationWeek 11: DH – Evolution of Parasites, AntibioticsWeek 12: DH – Convergence, Revision Session

Semester A: Evolution

Final Grade:

In Jean Smith’s Timetable; not yet on “SMART”

Page 20: Evolution lectures1&2 September 2013

http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, SpeciationWeek 11: DH – Evolution of Parasites, AntibioticsWeek 12: DH – Convergence, Revision Session

Semester A: Evolution

20% WorkshopFinal Grade:

In Jean Smith’s Timetable; not yet on “SMART”

Page 21: Evolution lectures1&2 September 2013

http://qmplus.qmul.ac.uk/course/view.php?id=3972

Week 1: YW – Introduction, Historical context, Neo DarwinismWeek 2: YW – Geological Aspects, Drivers of Evolution, Levels of EvolutionWeek 3: YW – Fossils, DNA and MoleculesWeek 4: YW – Human Evolution Week 5: DH – Evolution of Sex, Sexual SelectionWeek 6: AH – Genetic Basis of Evolution Week 7: Mid semester break, no lectures.Week 8: AH – Founder Effects, Genetic Drift + Computer Practical (tues or thurs afternoon) Week 9: AH – Mutation, Selection and Gene SelectionWeek 10: DH – Systematics, SpeciationWeek 11: DH – Evolution of Parasites, AntibioticsWeek 12: DH – Convergence, Revision Session

Semester A: Evolution

20% WorkshopFinal Grade:

80% Exam

In Jean Smith’s Timetable; not yet on “SMART”

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Semester B: Ecology

All lectures by David Hone Week 1: Introduction, Ecosystem servicesWeek 2: Extinctions, Plants (global view)Week 3: Invertebrate Ecology, Invertebrate InvadersWeek 4: Microbes, Techniques for Analysing MicrobesWeek 5: Plankton, Techniques for Analysing PlanktonWeek 6: Ecological Systems, Productivity,Week 7: Mid semester break – no lectures.Week 8: Salt Marsh Pollution, UK HabitatsWeek 9: Woodlands, Global WarmingWeek 10: Pollinator networks, SurveysWeek 11: Ecological Solutions, QMUL researchWeek 12: Revision session

+ Workshop + Fieldcourse

Final Grade:

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Semester B: Ecology

All lectures by David Hone Week 1: Introduction, Ecosystem servicesWeek 2: Extinctions, Plants (global view)Week 3: Invertebrate Ecology, Invertebrate InvadersWeek 4: Microbes, Techniques for Analysing MicrobesWeek 5: Plankton, Techniques for Analysing PlanktonWeek 6: Ecological Systems, Productivity,Week 7: Mid semester break – no lectures.Week 8: Salt Marsh Pollution, UK HabitatsWeek 9: Woodlands, Global WarmingWeek 10: Pollinator networks, SurveysWeek 11: Ecological Solutions, QMUL researchWeek 12: Revision session

+ Workshop + Fieldcourse

Final Grade: 80% Exam; 5% Workshop; 15% Fieldcourse

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9 Arts Quarter

Geography Square

Library Square

The Curve

Godward Square

West Gate East Gate

Alderney Road

Moody StreetLeatherdale Street

Bancroft Road

Holton Street

Massingham St

Longnor Road

Bradwell Street

Mile End Hospital

Mile End RoadStepney Green Tube Station Mile End Tube Station

Nuevo Burial Ground

Carlton Squ are

Gr ant ley S tr eet

Ban cro ft R

o ad

Po r telet Road

Mile End P lace

Ba n cro ft R

oad

Har fo

West field

W

a y

Re gent’s C

anal

ArtsOne 37ArtsTwo 35Arts Research Centre 39The Bancroft Building 31Bancroft Road Teaching Rooms 10Computer Science 6Engineering Building 15Fogg Building 13G.O. Jones Building 25Geography 26IRC 14Informatics Teaching Laboratories 5Joseph Priestley Building 41Library 32Law 36Lock-keeper’s Graduate Centre 42Mathematical Sciences 4Occupational Health and Safety Directorate 12The People’s Palace/Great Hall 16Queens’ Building 19Temporary Building 61

Mile End Campus Map Index

Educational/Research

Albert Stern Cottages 3

Albert Stern House 1

Beaumont Court 53

Chapman House 43

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Creed Court 57

France House 55

Feilden House 46

Hatton House 40

Ifor Evans Place 2

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Lodge House 50

Lynden House 59

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Maynard House 44

Pooley House 60

Selincourt House 51

Varey House 49

Residential Facilities

Advice and Counselling Service 27Blomeley Centre 48Bookshop 22Careers Centre 19Clock Tower 20CopyShop 56The Curve 47Drapers’ Bar and Kitchen 8Drunken Monkey 63Ground Café 33The Hive 24Infusion 9IT Services 19London Chamber Orchestra 64Mucci’s 29Occupational Health Service/ Student Health Service 28Octagon 19aPolice Box 38Post Room 17QMotion Fitness CentreSports Hall 7Residences Reception 54Santander Bank 62Security 18St Benet’s Chaplaincy 23Student Centre/Hub 34Village Shop 52Westfield Nursery 11

Information

Visitors who require furtherinformation or assistance please go to the Main Reception in theQueens’ Building.

Please do not smoke on thecampus.

These premises are alarmed andmonitored by CCTV, please callSecurity on 020 7882 5000 formore information.

Library/bookshop

Fitness centre

Bar

Coffee place

Eatery

Staff car park

Bicycle parking

Bicycle lockers

Cash machine

BL

i

i

12-1: Drapers Lecture Theater

Geography Building

9-10: Great Hall, People’s Palace

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SBC174/SBS110: Evolution (& Ecology)

“Nothing in Biology Makes Sense Except in the Light of Evolution”

Theodosius Dobzhansky 1973

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Recommended Reading

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Paperback 352 pages (2010)Publisher : Profile Books

Amazon price: £5.89

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Paperback 596 pages (11 Aug 2005)

Publisher : Oxford University PressAmazon price: £26.99

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+Lots of stuff on youtube.

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Lecture 1: Introduction and some historical perspectives

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Early ideasTwo camps: Fixity of species or change?

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Early ideasTwo camps: Fixity of species or change?

350 B.C. Aristotle:individuals in a “Species” are identical and unchanging

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Early ideasTwo camps: Fixity of species or change?

350 B.C. Aristotle:individuals in a “Species” are identical and unchanging

1749 Buffon Histoire Naturelle encyclopedia: The earth is very old. Species change.

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Early ideasTwo camps: Fixity of species or change?

350 B.C. Aristotle:individuals in a “Species” are identical and unchanging

1749 Buffon Histoire Naturelle encyclopedia: The earth is very old. Species change.

1785 Hutton. Geologist: Uniformitarianism: Changes in nature are gradual.

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Early ideasTwo camps: Fixity of species or change?

350 B.C. Aristotle:individuals in a “Species” are identical and unchanging

1749 Buffon Histoire Naturelle encyclopedia: The earth is very old. Species change.

1785 Hutton. Geologist: Uniformitarianism: Changes in nature are gradual.

1798 Cuvier : Fossils show extinct species (due to catastrophe). Species don’t change.

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3 Schools of evolutionary thought

1. Linnaeus:1700s

2. Lamarck: 1744—1829

3. Darwin & Wallace: 1800s

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Carolus Linnaeus (1707—1778)

• Swedish

• 180 books classified nature: “revealing the order of life created by God.”: “God created, Linnaeus arranged”

• Devised the binomial naming system: Genus species

• Thought that species do not change.

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3 Schools of evolutionary thought

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3 Schools of evolutionary thought• Linneaus: each species was

separately created.

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J-B. de Lamarck (1744—1829)

• Worked most of his life at the Muséum d’Histoire Naturelle (Paris)

• He promoted the idea that species change.

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3 Schools of evolutionary thought

1. Linnaeus:1700s

2. Lamarck: 1744-1829

3. Darwin & Wallace: 1800s

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3 Schools of evolutionary thought• Linneaus: each species was

separately created.

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3 Schools of evolutionary thought

• Lamarck: characteristics acquired by an individual are passed on to offspring.

• Linneaus: each species was separately created.

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Giraffe necks• Lamarck: stretching giraffes

lengthened their necks to reach tree-top vegetation. This acquired characteristic is passed to offspring.

• Darwin & Wallace: giraffes with long necks out-compete those with short necks.

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Giraffe necks• Lamarck: stretching giraffes

lengthened their necks to reach tree-top vegetation. This acquired characteristic is passed to offspring.

• Darwin & Wallace: giraffes with long necks out-compete those with short necks.

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3 Schools of evolutionary thought

1. Linnaeus:1700s

2. Lamarck: 1744—1829

3. Darwin & Wallace: 1800s

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Thomas Malthus (1766-1834)

Published on “principle of population”:Human populations increase faster (geometrically=exponentially) than food production (increases arithmetically = linearly)

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Charles Lyell (1797-1875)Geologist, strong proponent of uniformitarianism (slow gradual change)

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Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas:

Geologist, strong proponent of uniformitarianism (slow gradual change)

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Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

Geologist, strong proponent of uniformitarianism (slow gradual change)

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Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

1. Natural laws are constant across space and time

Geologist, strong proponent of uniformitarianism (slow gradual change)

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Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

1. Natural laws are constant across space and time2. Principle of parsimony: try to explain the past by

causes now in operation without inventing extra, fancy, or unknown causes, however plausible in logic, if available processes suffice.

Geologist, strong proponent of uniformitarianism (slow gradual change)

Page 55: Evolution lectures1&2 September 2013

Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

1. Natural laws are constant across space and time2. Principle of parsimony: try to explain the past by

causes now in operation without inventing extra, fancy, or unknown causes, however plausible in logic, if available processes suffice.

• Debatable:

Geologist, strong proponent of uniformitarianism (slow gradual change)

Page 56: Evolution lectures1&2 September 2013

Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

1. Natural laws are constant across space and time2. Principle of parsimony: try to explain the past by

causes now in operation without inventing extra, fancy, or unknown causes, however plausible in logic, if available processes suffice.

• Debatable:3. Change is slow, steady, and gradual.

Geologist, strong proponent of uniformitarianism (slow gradual change)

Page 57: Evolution lectures1&2 September 2013

Charles Lyell (1797-1875)

Uniformitarianism. 4 ideas: • Accepted by all scientists:

1. Natural laws are constant across space and time2. Principle of parsimony: try to explain the past by

causes now in operation without inventing extra, fancy, or unknown causes, however plausible in logic, if available processes suffice.

• Debatable:3. Change is slow, steady, and gradual.4. Change is evenly distributed throughout space and time.

Geologist, strong proponent of uniformitarianism (slow gradual change)

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Darwin & the Voyage of the Beagle

1831-1836

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Galápagos finches

• Analysis -> finches derived from one ancestral species arriving from the mainland to populate and diversify across the islands (adaptive radiation).

1° 30'

0° 30'

0° 30'

1° 30'

92° 91° 30' 91° 90° 30' 90° 89° 30' 89°

92° 91° 30' 91° 90° 30' 90° 89° 30' 89°

San Salvador(Santiago / James)

Santa Cruz(Indefatigable)

Santa Fé(Barrington)

Marchena(Bindloe)

Genovesa(Tower)

Pinta(Abington)

Fernandina(Marlborough)

Isabela(Albemarle)

San Cristóbal(Chatham)

Floreana(Santa María / Charles)

Española(Hood)

Rábida(Jervis)

Pinzón(Duncan)

Tortuga(Brattle)

Baltra (South Seymour)

Darwin(Culpepper)

Wolf(Wenman)

Bartolomé

Seymour Norte(North Seymour)

Plaza Sur

Cuatro Hermanos(Crossman)

Galápagos Islands

Lobos

Gardner

Mosquera

Daphne Mayor

Caamaño

Gardner

Redonda

Albany

Sombrero Chino

León-Dormido-Felsen(Kicker Rock)

EnderbyCampión (Champion)

Caldwell

Eden

Bainbridge

Bahia Gardner(Gardner Bay)

Bahia Post Office(Post Office Bay)

Bahia Darwin(Darwin Bay)

BahiaUrbina(Urbina

Bay)

Tagus Cove

Bahia Tortuga(Tortuga Bay)

Bahia James(James Bay) Bahia Sullivan

Bahia Ballena (Ballena Bay)Bahia Isabel(Elizabeth Bay)

Canal Bolívar

Canal Isabela

BahiaCártago

Bahia deBancos

(Banks Bay)

Canal de San Salvador

Canal de Pinzón

Canal de Pinta

Canal

de M

arche

na

Canal de Santa CruzBahia d'Esteban

Hancock Bank

McGowen Reef

Canal de Santa Fé

PACIFIC OCEAN

Caleta Iguana

Bahia Villamil

Bahia Rosa Blanca

Bahia deHobbs

Bahia Conway (Conway Bay)

Punta Suárez

Punta Espinosa

Punta Cormorant

El Barranco

Punta Albemarle

Punta Vicente Roca

PuntaGarcia

Punta Pitt

Punta Moreno

Punta Tortuga

Cabo Marshall

Punta Cristóbal

Cabo Rosa

Cabo Woodford

Punta Valdizán

Cabo Berkeley

Cabo Douglas

Cabo Chalmers

Punta Cevallos

Cabo Hammond

Punta Mangle

Punta Sur

Punta Veintimilla

Punta Sur

Punta Rocafuerte

PuntaNuñez

Punta MejíaPunta Montalvo

PuntaEspejo

Punta Calle

Cabo Ibbetson

PuntaBaquerizo

Punta Ayora

Punta Wreck

Punta Carrión

CaboNepean

Cabo Barrington

PuntaAlfaro

Punta Flores

Puerto

Baquerizo

Moreno

Puerto Velasco Ibarra

PuertoIsidroAyora

Puerto Villamil

La Cumbre1 476 m

Cerro Pajas640 m

75 m

Wolf1 707 m

Alcedo1 130 m

Cerro Azul1 640 m

Darwin1 330 m

Ecuador>790 m

Sierra Negra1 124 m

340 m

777 m

458 m

Cerro San Joaquin730 m

Cerro Tijeretas

Cerro Crocker864 m

Cerro Dragón

Cerro Pelado907 m

253 m

Cerro Alieri

Cerro Brujo

Los Gemelos

IstmoPerry

Chico

Azufre

367 m

Equator

1,707 m1,500 m1,250 m1,000 m

750 m500 m250 m100 m50 m

0-200 m-500 m-750 m

-1,000 m-1,500 m-2,000 m-2,500 m-3,000 m-3,500 m-3,650 m

0 300(mi)

0 500(km)

90° 85° 80° 75°

0° QUITO

COLOMBIA

PERU

PANAMA

COSTA

RICA

ECUADOR

PACIFIC

OCEAN

0 100(km)

0 60(mi)Projection: UTM (WGS84 Datum)

IslandAlternate NamePeakProvincial CapitalCantonal CapitalVillageAirport

Isabela(Albermarle)

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© BskyB - David Attenborough - Galápagos 2013

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Darwin1837

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Charles Darwin (1809-1882)

• Darwin at about 30 years old, and three years back from his voyage aboard HMS Beagle (1831-1836)

• The Origin of Species was published several decades later in 1859 (prompted by competition from Alfred Russel Wallace).

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Alfred Russel Wallace (1823-1913)

• Wallace in his thirties. (National Portrait Gallery, London.)

• In 1858 he came up with similar ideas to Darwin about the mechanism of evolutionary change

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Read at the Linnean Society

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Evolution by natural selection

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Under optimal conditions, populations indefinitely increase in size.

Evolution by natural selection

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Under optimal conditions, populations indefinitely increase in size.

Because they do not: * either not all animals reach maturity * and/or some animals breed less

Evolution by natural selection

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Under optimal conditions, populations indefinitely increase in size.

Because they do not: * either not all animals reach maturity * and/or some animals breed less

Individuals within a population differ (natural variation)

Evolution by natural selection

Page 70: Evolution lectures1&2 September 2013

Under optimal conditions, populations indefinitely increase in size.

Because they do not: * either not all animals reach maturity * and/or some animals breed less

Individuals within a population differ (natural variation)These differences (traits) may affect survival/reproduction

Evolution by natural selection

Page 71: Evolution lectures1&2 September 2013

Under optimal conditions, populations indefinitely increase in size.

Because they do not: * either not all animals reach maturity * and/or some animals breed less

Individuals within a population differ (natural variation)These differences (traits) may affect survival/reproductionTraits are heritable: passed on from parents to offspring

Evolution by natural selection

Page 72: Evolution lectures1&2 September 2013

Under optimal conditions, populations indefinitely increase in size.

Because they do not: * either not all animals reach maturity * and/or some animals breed less

Individuals within a population differ (natural variation)These differences (traits) may affect survival/reproductionTraits are heritable: passed on from parents to offspring

Advantageous traits lead to increased survival of certain lineages

Evolution by natural selection

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3 Schools of evolutionary thought

• Lamarck: characteristics acquired by an individual are passed on to offspring.

• Linneaus: each species was separately created.

Page 74: Evolution lectures1&2 September 2013

3 Schools of evolutionary thought

• Lamarck: characteristics acquired by an individual are passed on to offspring.

• Linneaus: each species was separately created.

• Darwin & Wallace: viewed evolution as descent with modification.

Page 75: Evolution lectures1&2 September 2013

Giraffe necks• Lamarck: stretching giraffes

lengthened their necks to reach tree-top vegetation. This acquired characteristic is passed to offspring.

• Darwin & Wallace: giraffes with long necks have more offspring than those with short necks.

Page 76: Evolution lectures1&2 September 2013

Giraffe necks• Lamarck: stretching giraffes

lengthened their necks to reach tree-top vegetation. This acquired characteristic is passed to offspring.

• Darwin & Wallace: giraffes with long necks have more offspring than those with short necks.

Page 77: Evolution lectures1&2 September 2013

Giraffe necks• Lamarck: stretching giraffes

lengthened their necks to reach tree-top vegetation. This acquired characteristic is passed to offspring.

• Darwin & Wallace: giraffes with long necks have more offspring than those with short necks.

Actually: sexual selection??

Page 78: Evolution lectures1&2 September 2013

(1859) "The Origin of Species"

Page 79: Evolution lectures1&2 September 2013

A scheme or system of ideas or statements held as an explanation or account of a group of facts or phenomena; a hypothesis that has been confirmed or established by observation and experiment, and is propounded or accepted as accounting for the known facts.

theory |ˈTHēərē, ˈTHi(ə)rē|noun ( pl. theories )

Darwin's theory of evolution by natural selection

(Oxford English Dictionary)

Page 80: Evolution lectures1&2 September 2013

Darwin's Theory of Evolution (1859)"The Origin of Species"

Page 81: Evolution lectures1&2 September 2013

Darwin's Theory of Evolution (1859)"The Origin of Species"

• There is inherited variation within species.

Page 82: Evolution lectures1&2 September 2013

Darwin's Theory of Evolution (1859)"The Origin of Species"

• There is inherited variation within species.

• There is competition for survival within species.

Page 83: Evolution lectures1&2 September 2013

Darwin's Theory of Evolution (1859)"The Origin of Species"

• There is inherited variation within species.

• There is competition for survival within species.

• Natural selection is the process whereby genetically inherited characteristics become more or less common in a population as a function of the differential reproductive success of the bearers of these characteristics.

Page 84: Evolution lectures1&2 September 2013

Darwin's Theory of Evolution (1859)"The Origin of Species"

• There is inherited variation within species.

• There is competition for survival within species.

• Natural selection is the process whereby genetically inherited characteristics become more or less common in a population as a function of the differential reproductive success of the bearers of these characteristics.

•This process occurring independently on two populations of a single species leads to the accumulation of differences between the populations - and ultimately to speciation.

Page 85: Evolution lectures1&2 September 2013

• But environmental conditions change: What was advantageous yesterday may be a disadvantage today.

• And evolution also occurs by: • genetic drift• sexual selection• artificial selection (selective breeding)

Natural selection leads to adaptive change

Page 86: Evolution lectures1&2 September 2013

Summary of Lecture 1

Ideas on how the diversity of life was/is produced date back to the ancient Greeks

These ideas developed considerably in the 1800s, culminating in the Theory of Evolution by Natural Selection

Page 87: Evolution lectures1&2 September 2013

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12-1: Drapers Lecture Theater

Geography Building

9-10: Great Hall, People’s Palace

Page 88: Evolution lectures1&2 September 2013
Page 89: Evolution lectures1&2 September 2013

Lecture 2

Darwin’s evidence for evolution

and

“Neo-Darwinism” or “The Modern Synthesis”

Page 90: Evolution lectures1&2 September 2013

Darwin’s evidence for evolution

Page 91: Evolution lectures1&2 September 2013

1. The Fossil Record

Darwin’s evidence for evolution

Page 92: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

Darwin’s evidence for evolution

Page 93: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology

Darwin’s evidence for evolution

Page 94: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology4. Vestigial Structures

Darwin’s evidence for evolution

Page 95: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology4. Vestigial Structures

5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 96: Evolution lectures1&2 September 2013

1. The Fossil Record: Paleontology

Random order Reality: there is

sequential order to the fossil record

Lecture 5

Page 97: Evolution lectures1&2 September 2013

1. The Fossil Record: Paleontology

Random order Reality: there is

sequential order to the fossil record

Lecture 5

Page 98: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy3. Comparative Embryology4. Vestigial Structures

5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 99: Evolution lectures1&2 September 2013

2. Comparative anatomy

• Correspondence between parts and comparison of forelimbs among four vertebrates.

Page 100: Evolution lectures1&2 September 2013

Diversity of type, unity of pattern

• Although these vertebrate species differ, the underlying pattern of the forelimb is fundamentally the same.

Page 101: Evolution lectures1&2 September 2013

Homology and analogy

• Homology - vertebrate forearms: the bat wing, mouse forearm, and human arm are homologous structures as all are composed of similar bones inherited from a recent common ancestor.

Page 102: Evolution lectures1&2 September 2013

Homology and analogy

• Analogy: The wings of bats, butterflies, and birds evolved independently, not from a recent common ancestor. But they have a similar function, flight, and so are analogous.

(here: convergent evolution)

Page 103: Evolution lectures1&2 September 2013

Morphological series - evolution of limbs from fins

• Note homology of structures

Page 104: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology4. Vestigial Structures

5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 105: Evolution lectures1&2 September 2013

3. Comparative Embryology

• Embryonic retention of ancestral characteristics in vertebrates (e.g. gills and tails)

Page 106: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology

4. Vestigial Structures5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 107: Evolution lectures1&2 September 2013

4. Vestigial features I • Whales: hips and hind limbs are reduced to small bones with no function.

• In primitive snakes, the remnants of hind limbs persist (forelimbs are absent).

Page 108: Evolution lectures1&2 September 2013

Vestigial features II

• The human appendix is a vestigial structure, reduced from the caecum of primate ancestors.

Page 109: Evolution lectures1&2 September 2013

Vestigial features II

• The human appendix is a vestigial structure, reduced from the caecum of primate ancestors.

• Others: muscles to move ears, “goose bumps”

Page 110: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology4. Vestigial Structures

5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 111: Evolution lectures1&2 September 2013

Von Holdt et al. (2010) Nature 464, 898-903

5. Domestication (artificial selection)

Page 112: Evolution lectures1&2 September 2013
Page 113: Evolution lectures1&2 September 2013
Page 114: Evolution lectures1&2 September 2013
Page 115: Evolution lectures1&2 September 2013

1. The Fossil Record

2. Comparative Anatomy

3. Comparative Embryology4. Vestigial Structures

5. Domestication (artificial selection)

Darwin’s evidence for evolution

Page 116: Evolution lectures1&2 September 2013

Patterns and processes in evolutionary thought

Process

Inferenceabout

evolutionaryprocess

Inferenceabout

effect ontaxonomic

pattern

Pattern

Page 117: Evolution lectures1&2 September 2013

Lecture 2

Darwin’s evidence for evolution

and

“Neo-Darwinism” or “The Modern Synthesis”

Page 118: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”

Page 119: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

Page 120: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

• Darwin’s Theory of Evolution by Natural Selection

Page 121: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

• Darwin’s Theory of Evolution by Natural Selection• Mendel’s Laws of Heredity (1866, 1900; see SBS 008)

Page 122: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

• Darwin’s Theory of Evolution by Natural Selection• Mendel’s Laws of Heredity (1866, 1900; see SBS 008)• Cytogenetics (1902, 1904 - )

Page 123: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

• Darwin’s Theory of Evolution by Natural Selection• Mendel’s Laws of Heredity (1866, 1900; see SBS 008)• Cytogenetics (1902, 1904 - )• Population Genetics (1908; see later lectures)

Page 124: Evolution lectures1&2 September 2013

“Neo-Darwinism”or

“The Modern Synthesis”The same thing... but with better

understanding of how things work.

• Darwin’s Theory of Evolution by Natural Selection• Mendel’s Laws of Heredity (1866, 1900; see SBS 008)• Cytogenetics (1902, 1904 - )• Population Genetics (1908; see later lectures) • Molecular genetics (1970s- ; see SBS 633/210 and later lectures)

Page 125: Evolution lectures1&2 September 2013

Gregor Mendel (1822-1984)

Worked out the basic laws of inheritance:Segregation and independent assortment

Page 126: Evolution lectures1&2 September 2013

J.B.S. Haldane (1892-1964)

With Fisher and Wright, one of the founders of population genetics.

“The Causes of Evolution” (1932): first major contribution to what became the “modern evolutionary synthesis".

Page 127: Evolution lectures1&2 September 2013

R.A. Fisher (1890-1962)

Invented Analysis of Variance and other stats!

Worked on the theory of population genetics

Page 128: Evolution lectures1&2 September 2013

Theodosius Dobzhansky (1900-1975)

“Nothing in Biology makes sense except in the light of

evolution”.

Theodosius Dobzhansky's Genetics and the Origin of Species, published in 1937.

Page 129: Evolution lectures1&2 September 2013

Ernst Mayr (1904-2005)

Worked on speciation and the definition of species.

Page 130: Evolution lectures1&2 September 2013

Ernst Mayr (1904-2005)

Worked on speciation and the definition of species.

Page 131: Evolution lectures1&2 September 2013

Ernst Mayr (1904-2005)

Worked on speciation and the definition of species.

Page 132: Evolution lectures1&2 September 2013

William D. Hamilton (1936 - 2000)

Explained how natural selection acts on social behaviour (“kin selection”)

Explained weird sex ratios

relatedness * benefit > cost

Page 133: Evolution lectures1&2 September 2013

John Maynard-Smith (1920-2004)

Most widely known for applying game theory

to evolutionary biology

Page 135: Evolution lectures1&2 September 2013

Summary/overview of Lecture 2

EVOLUTION(“descent with modification”)

Pattern Process

• Fossil record• Dating methods

• Molecular evolution• Molecular clocks

• Mechanisms• Environmental drivers

•climate•cont. drift•extinctions etc

The Modern Synthesis

Page 136: Evolution lectures1&2 September 2013

What next?• Epigenetics

• Cultural transmission

• Niche construction

“Extended Evolutionary Synthesis” ?

• Evodevo

• Comparative genomics

• Systems Biology

“Postmodern Synthesis” ?

Page 137: Evolution lectures1&2 September 2013
Page 138: Evolution lectures1&2 September 2013
Page 139: Evolution lectures1&2 September 2013

Pastafarianism - Church of the Flying Spaghetti Monster

Page 140: Evolution lectures1&2 September 2013

Early ideas

Fixity of species or change?

Page 141: Evolution lectures1&2 September 2013

FIGURE 12.5 Macroevolution and Microevolution

• The overall pattern of tetrapod evolution (macroevolution) can be examined in closer detail. The cross section in time through Sauropod evolution reveals the multiple species lineages of which it is composed. At the bottom, one lineage is enlarged, showing the populations comprising the species (microevolution).

Page 142: Evolution lectures1&2 September 2013

FactCourse

Mechanism

Page 143: Evolution lectures1&2 September 2013

Evolutionary process

• Some further thoughts:

• Evolution of higher taxa - is it different from speciation within taxa?

• e.g. natural selection, chance, species selection?

• How is morphological integration maintained (functional continuity)?

• e.g. correlated progression, developmental feedback

WP

Page 144: Evolution lectures1&2 September 2013

Major drivers of evolution

Vulcanism

Continental movement

Bolide impact

Climate change?

?

Consequences: Large scale migrations Speciation

Mass extinctions Adaptive radiations

Page 145: Evolution lectures1&2 September 2013

Different Functions but Similar Underlying Forelimb Anatomy

• Forelimbs of bat, mole, and dugong. Each limb performs a different function: flight, digging, and swimming. All are superficially different, but all three share a common, underlying anatomical plan.

Page 146: Evolution lectures1&2 September 2013

Diversity of Type, Unity of Pattern

• (a) Similarities. Parts may be similar in ancestry, function, and/or appearance. Respectively, these are defined as homology, analogy, or homoplasy. (b) Although the vertebrate species differ, the underlying pattern of the forelimb is fundamentally the same.

Page 147: Evolution lectures1&2 September 2013

FIGURE 6.5 Morphological Series

• From four-toed to single-toed modern horses, this morphological series illustrates the correspondence between parts (feet, teeth, skull) and their modifications. Here, the stratigraphic position of these species is added.

Page 148: Evolution lectures1&2 September 2013

Evolution of horses

• Evolution of horses

Page 149: Evolution lectures1&2 September 2013

Morphological series—evolution of jaws

• Vertebrate jaws evolved from the front set of gill arches of jawless ancestors.

Page 150: Evolution lectures1&2 September 2013

FIGURE 6.8 Convergence of Design

• Groups of animals often adapt to habitats that differ from those of most other members of their group. Most birds fly, but some, such as ostriches, cannot, and live exclusively on land; others, such as penguins, live much of their lives in water. Most mammals are terrestrial, but some fly (bats) and others live exclusively in water (whales, dolphins). “Flying” fishes take to the air. As species from different groups enter similar habitats, they experience similar biological demands. Convergence to similar habitats, in part, accounts for the sleek bodies and fins or flippers of tuna and dolphins, because similar functions (analogy) are served by similar parts under similar conditions. Yet tuna and dolphins come from different ancestries and

Page 151: Evolution lectures1&2 September 2013

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