Endosymbiosis and the origin of bioenergetic - John F. Allen
Transcript of Endosymbiosis and the origin of bioenergetic - John F. Allen
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Lectures by
John F. Allen
School of Biological and Chemical Sciences, Queen Mary, University of London
Cell Biology and Developmental Genetics
1
jfallen.org
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Cell Biology and Developmental GeneticsLectures by John F. Allen
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
Endosymbiosis and the origin of bioenergetic organelles. A modern view
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
Endosymbiosis and the origin of bioenergetic organelles. A modern view
Mitochondria as we know them and don't know them
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
Endosymbiosis and the origin of bioenergetic organelles. A modern view
Mitochondria as we know them and don't know them
Why do chloroplasts and mitochondria have genomes?
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
Endosymbiosis and the origin of bioenergetic organelles. A modern view
Mitochondria as we know them and don't know them
Why do chloroplasts and mitochondria have genomes?
Co-location for Redox Regulation
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Endosymbiosis and the origin of bioenergetic organelles. Some history
Endosymbiosis and the origin of bioenergetic organelles. A modern view
Mitochondria as we know them and don't know them
Why do chloroplasts and mitochondria have genomes?
Co-location for Redox Regulation
Mitochondria, ageing, and sex – energy versus fidelity
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Cell Biology and Developmental GeneticsLectures by John F. Allen
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Slides and supplementary information:
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Cell Biology and Developmental GeneticsLectures by John F. Allen
Slides and supplementary information:
jfallen.org/lectures
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Lecture 1
Endosymbiosis and the origin of bioenergetic organelles.
Some history
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What are bioenergetic organelles?
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What are bioenergetic organelles?
• Chloroplasts
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
• Mitochondria
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
• Mitochondria
• Membrane-bound compartments in eukaryotic cells
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
• Mitochondria
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in respiration
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What are bioenergetic organelles?
• Chloroplasts
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in photosynthesis
• Contain a genome and a complete apparatus of gene expression
• Mitochondria
• Membrane-bound compartments in eukaryotic cells
• Function in energy conversion in respiration
• Contain a genome and a complete apparatus of gene expression
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• © 2002 by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, and Peter Walter.
Figure 14-34. Electron micrographs of chloroplasts. (A) In a wheat leaf cell, a thin rim of cytoplasm—containing chloroplasts, the nucleus, and mitochondria—surrounds a large vacuole. (B) A thin section of a single chloroplast, showing the chloroplast envelope, starch granules, and lipid (fat) droplets that have accumulated in the stroma as a result of the biosyntheses occurring there. (C) A high-magnification view of two grana. A granum is a stack of thylakoids.
(Courtesy of K. Plaskitt.)
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Figure 14-35. The chloroplast. This photosynthetic organelle contains three distinct membranes (the outer membrane, the inner membrane, and the thylakoid membrane) that define three separate internal compartments (the intermembrane space, the stroma, and the thylakoid space). The thylakoid membrane contains all the energy-generating systems of the chloroplast, including its chlorophyll. In electron micrographs, this membrane seems to be broken up into separate units that
enclose individual flattened vesicles (see Figure 14-34), but these are probably joined into a single, highly folded membrane in each chloroplast. As indicated, the individual thylakoids are interconnected, and they tend to stack to form grana.
• © 2002 by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, and Peter Walter.
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Figure 14-36. A mitochondrion and chloroplast compared. A chloroplast is generally much larger than a mitochondrion and contains, in addition to an outer and inner membrane, a thylakoid membrane enclosing a thylakoid space. Unlike the chloroplast inner
membrane, the inner mitochondrial membrane is folded into cristae to increase its surface area.
• © 2002 by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, and Peter Walter.
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What is symbiosis?
• Simon Schwendener (1867) discovered that lichens are a consortium of two organisms - a fungus and an alga
• Heinrich Anton de Bary (1878) used “symbiosis” (“same living”) to describe this association
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The origin of the Endosymbiont hypothesis
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Constantin Mereschkowsky,‘Über Natur und Ursprung der Chromatophoren im Pflanzenreiche‘. Biol. Centralbl., 25 (1905): 593–604.
English translation by Martin, W. And Kowallik, K. (1999) Eur. J. Phycol. 34: 287-295.
Konstantin Sergejewicz Mereschkowsky (1855-1921)http://en.wikipedia.org/wiki/Konstantin_Mereschkowski
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Background to the endosymbiont hypothesis, 1:
• plastids multiply by division• as observed repeatedly in plants and algae in 19th century
plastids in Arabidopsis thaliana
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Background to the endosymbiont hypothesis, 2:
The green pigment saturates the stroma uniformly or is distributed
therein in the form of small droplets
The green pigment saturates the plasm uniformly or is distributed
therein in the form of small droplets
Small, green (probably blue-green originally, as with Cyanomonas),
round or oval bodies of very simple structure
Small, blue-green, round or oval bodies of very simple structure
plastidscyanobacteria
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Reproduction: through divisionReproduction: through division
Nutrition: assimilation of CO2 in the lightNutrition: assimilation of CO2 in the light
Do not possess a true nucleus, rather certain structures (pyrenoids) that can be
viewed as a transformed, primitive nucleus
Do not possess a true nucleus, rather just certain structures (nucleic granules) that can be viewed as a predecessor of
the nucleus
plastidscyanobacteria
Background to the endosymbiont hypothesis, 3:
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Plastids are organs
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Plastids are organs
• accepted view was that plastids were organs
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Plastids are organs
• accepted view was that plastids were organs
• autonomously derived from cytoplasm
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Plastids are organs
• accepted view was that plastids were organs
• autonomously derived from cytoplasm
• Mereschkowsky: ‘…this notion is, by no means, a finding supported by direct observation…’
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Plastids are organs
soybean
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Plastids are organs
• why was it thought plastids arose de novo?
soybean
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Plastids are organs
• why was it thought plastids arose de novo?• plant parts that are kept in the dark turn green when exposed to light
soybean
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Plastids are organs
• why was it thought plastids arose de novo?• plant parts that are kept in the dark turn green when exposed to light• Schimper (1885) showed that chlorophyll arises de novo but not its carriers
soybean
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Plastids are not organs
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Plastids are not organs
• plastids do not arise de novo but from pre-existing (sometimes colourless) plastids
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Plastids are not organs
• plastids do not arise de novo but from pre-existing (sometimes colourless) plastids
• Mereschkowsky: ‘this hypothesis is...founded upon an error in logic. And those who wish to maintain their view...reveal that they lack a proper grasp of the nature of heredity’
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Continuity of plastids
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Continuity of plastids
• plastids arise from pre-existing plastids, never de novo
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Continuity of plastids
• plastids arise from pre-existing plastids, never de novo
• so, at one stage, a plastid established itself in a plant lineage
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Continuity of plastids
• plastids arise from pre-existing plastids, never de novo
• so, at one stage, a plastid established itself in a plant lineage
• therefore, plastids must be ‘foreign bodies’ or symbionts
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Plastids are independent
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Plastids are independent
• nucleus is central to cell
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Plastids are independent
• nucleus is central to cell
• if nucleus is removed, cells do not proliferate
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Plastids are independent
• nucleus is central to cell
• if nucleus is removed, cells do not proliferate
• plastids continue to function in enucleated cells
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Plastids are independent
• nucleus is central to cell
• if nucleus is removed, cells do not proliferate
• plastids continue to function in enucleated cells
• grow and multiply by division
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Plastids are independent
• nucleus is central to cell
• if nucleus is removed, cells do not proliferate
• plastids continue to function in enucleated cells
• grow and multiply by division
• assimilate CO2
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Plastids are independent
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Plastids are independent
• plastids function biochemically even in vitro
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Plastids are independent
• plastids function biochemically even in vitro
• plastid produce lipids that are distinct from those from the rest of the cell
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Plastids are independent
• plastids function biochemically even in vitro
• plastid produce lipids that are distinct from those from the rest of the cell
• plastids have a colourless mass (pyrenoid) similar to bacteria (this is their DNA but unknown at the time) and produce protein
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Plastids are independent
• plastids function biochemically even in vitro
• plastid produce lipids that are distinct from those from the rest of the cell
• plastids have a colourless mass (pyrenoid) similar to bacteria (this is their DNA but unknown at the time) and produce protein
• so, plastids behave like independent organisms
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Analogy with hydra
polyp Hydra viridis contains endosymbiotic zoochlorellae (algae)
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Analogy with hydra
• some hydra contain symbionts that behave as plastids in plants
polyp Hydra viridis contains endosymbiotic zoochlorellae (algae)
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Analogy with hydra
• some hydra contain symbionts that behave as plastids in plants• these also originate by division
polyp Hydra viridis contains endosymbiotic zoochlorellae (algae)
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Analogy with hydra
• some hydra contain symbionts that behave as plastids in plants• these also originate by division• these symbionts can live outside the host
polyp Hydra viridis contains endosymbiotic zoochlorellae (algae)
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Free-living plastids..?
• Mereschkowsky: ‘A theory such as the one suggested here would gain considerably...if...free-living organisms with similarity to the symbionts could be demonstrated’ • cyanobacteria (cyanophytes; blue-green algae)
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Anabaena cylindricaWatercolour, 1946, by G. E. Fogg
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Endosymbiosis with cyanobacteria
• Living examples are known
cyanobacterium, Richelia intercellularis in a diatom,Rhizosolenia styliformis
rhizopod Paulinella chromatophora parasitized bycyanobacteria
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Plastids are endosymbionts
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Plastids are endosymbionts
• plastids arise by division from previous plastids
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Plastids are endosymbionts
• plastids arise by division from previous plastids
• plastids continue to function normally in enucleated cells
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Plastids are endosymbionts
• plastids arise by division from previous plastids
• plastids continue to function normally in enucleated cells
• plastids make protein
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Plastids are endosymbionts
• plastids arise by division from previous plastids
• plastids continue to function normally in enucleated cells
• plastids make protein
• cyanobacteria seem very similar to plastids
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Plastids are endosymbionts
• plastids arise by division from previous plastids
• plastids continue to function normally in enucleated cells
• plastids make protein
• cyanobacteria seem very similar to plastids
• cyanobacteria are known that live in symbioses with other organisms
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Further consequences
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Further consequences
• ‘According to this theory, the plant cell is nothing other than an animal cell with cyanobacteria that have invaded it’
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Further consequences
• ‘According to this theory, the plant cell is nothing other than an animal cell with cyanobacteria that have invaded it’
• ‘the green, the brown and the red algae could have thus originated independently’
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Further consequences
• ‘According to this theory, the plant cell is nothing other than an animal cell with cyanobacteria that have invaded it’
• ‘the green, the brown and the red algae could have thus originated independently’
• ‘All of the peculiarities that are characteristic for plants and that distinguish them from animals, are…the natural result of a symbiosis between an animal cell and a CO2-assimilating cyanobacterium’
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Discredited until the 1970s
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Discredited until the 1970s
• Popular theory in early 20th century
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Discredited until the 1970s
• Popular theory in early 20th century
• Wallin postulated a similar theory for mitochondria in 1927
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Discredited until the 1970s
• Popular theory in early 20th century
• Wallin postulated a similar theory for mitochondria in 1927
• Wilson ridiculed these ideas: ‘To many, no doubt, such speculations may appear too fantastic for present mention in polite biological society...’
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Discredited until the 1970s
• Popular theory in early 20th century
• Wallin postulated a similar theory for mitochondria in 1927
• Wilson ridiculed these ideas: ‘To many, no doubt, such speculations may appear too fantastic for present mention in polite biological society...’
• These hypotheses were made before molecular biology, before it was known that DNA was the hereditary material
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Typical prokaryotic (left) and eukaryotic (right) cells.W. Ford Doolittle Nature 392, 15-16, 1998
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The endosymbiont hypothesis for the origin of mitochondria. W. Ford Doolittle Nature 392, 15-16, 1998
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Summary
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Summary
• Mereschkowsky proposed 100 years ago that the bodies - ‘chromatophores’ found in green plants and algae are ‘enslaved ’ cyanobacteria
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Summary
• Mereschkowsky proposed 100 years ago that the bodies - ‘chromatophores’ found in green plants and algae are ‘enslaved ’ cyanobacteria
•The endosymbiont hypothesis for the origin of chloroplasts and mitochondria is now orthodox, but there is controversy over the nature of the symbionts and their place in eukaryote evolution
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The origin of the Endosymbiont hypothesis
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The origin of the Endosymbiont hypothesis
• Konstantin Sergejewiz Merezkovskij (1855-1921)
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The origin of the Endosymbiont hypothesis
• Konstantin Sergejewiz Merezkovskij (1855-1921) (University in Kasan, Russia)
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The origin of the Endosymbiont hypothesis
• Konstantin Sergejewiz Merezkovskij (1855-1921) (University in Kasan, Russia)
• Constantin Mereschkowsky,‘Über Natur und Ursprung der Chromatophoren im
Pflanzenreiche’. Biol. Centralbl., 25 (1905): 593–604
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The origin of the Endosymbiont hypothesis
• Konstantin Sergejewiz Merezkovskij (1855-1921) (University in Kasan, Russia)
• Constantin Mereschkowsky,‘Über Natur und Ursprung der Chromatophoren im
Pflanzenreiche’. Biol. Centralbl., 25 (1905): 593–604
Constantin Mereschkowsky,‘Über Natur und Ursprung der Chromatophoren im Pflanzenreiche‘. Biol.
Centralbl., 25 (1905): 593–604. English translation by Martin, W. And Kowallik, K. (1999) Eur. J. Phycol. 34:
287-295.
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Konstantin Sergejewicz Mereschkowsky (1855-1921)http://en.wikipedia.org/wiki/Konstantin_Mereschkowski
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The renaissance of the Endosymbiont hypothesis
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The renaissance of the Endosymbiont hypothesis
• Lynn Margulis (b. 1938)
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The renaissance of the Endosymbiont hypothesis
• Lynn Margulis (b. 1938) (University of Massachussetts, Amhurst)
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The renaissance of the Endosymbiont hypothesis
• Lynn Margulis (b. 1938) (University of Massachussetts, Amhurst)
• Margulis, Lynn, 1970, Origin of Eukaryotic Cells, Yale University Press
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The renaissance of the Endosymbiont hypothesis
• Lynn Margulis (b. 1938) (University of Massachussetts, Amhurst)
• Margulis, Lynn, 1970, Origin of Eukaryotic Cells, Yale University Press
Margulis, Lynn, 1992, Symbiosis in Cell Evolution: Microbial Communities in the Archean and Proterozoic
Eons, W.H. Freeman
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Lynn Margulis (b. 1938)http://en.wikipedia.org/wiki/Lynn_Margulis
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Lecture 2. October 28th, 2010. 11.00 a.m.
Endosymbiosis and the origin of bioenergetic organelles. A modern view