EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ?...
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Transcript of EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ?...
![Page 1: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/1.jpg)
EEG/MEG Source LocalisationSPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008
??
Jérémie Mattout, Christophe Phillips
Jean DaunizeauGuillaume FlandinKarl FristonRik HensonStefan KiebelVladimir Litvak
![Page 2: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/2.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 3: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/3.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 4: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/4.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Introduction: overview
![Page 5: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/5.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
EEG/MEG source reconstruction process
Forwardmodel
Inverseproblem
Introduction: overview
![Page 6: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/6.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 7: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/7.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Forward model: formulation
EJfY
Forwardmodel
data sourceparameters
noiseforwardoperator
![Page 8: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/8.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
source biophysical model: current dipole
EEG/MEG source models
EquivalentCurrent
Dipoles (ECD)
Imaging orDistributed
Forward model: source space
- few dipoles withfree location and orientation
- many dipoles withfixed location and orientation
![Page 9: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/9.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Forward model: imaging/distributed model
EKJY
data dipoleamplitudes
noisegain matrix
![Page 10: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/10.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 11: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/11.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
« Will it ever happen that mathematicians will know enough about the physiology of the brain, and neurophysiologists enough of mathematical discovery, for efficient cooperation to be possible ? »
Jacques Hadamard (1865-1963)
Inverse problem: an ill-posed problem
Inverseproblem
1. Existence2. Unicity3. Stability
![Page 12: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/12.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Inverse problem: an ill-posed problem
« Will it ever happen that mathematicians will know enough about the physiology of the brain, and neurophysiologists enough of mathematical discovery, for efficient cooperation to be possible ? »
Jacques Hadamard (1865-1963)
1. Existence2. Unicity3. Stability
Inverseproblem
![Page 13: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/13.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Inverse problem: an ill-posed problem
« Will it ever happen that mathematicians will know enough about the physiology of the brain, and neurophysiologists enough of mathematical discovery, for efficient cooperation to be possible ? »
Jacques Hadamard (1865-1963)
1. Existence2. Unicity3. Stability
Inverseproblem
Introduction of prior knowledge (regularization) is needed
![Page 14: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/14.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Inverse problem: regularization
Data fit
Adequacywith other
modalities
Spatial and temporal priors
W = I : minimum norm
W = Δ : maximum smoothness (LORETA)
data fit prior(regularization term)
![Page 15: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/15.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 16: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/16.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Bayesian inference: probabilistic formulation
likelihood prior
posteriorevidence
Forwardmodel
Inverseproblem posterior
likelihood
![Page 17: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/17.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Bayesian inference: hierarchical linear model
sensor (1st) level
source (2nd) level
Q : (known) variance components
(λ,μ) : (unknown) hyperparameters
likelihood
prior
qeqee QQC 1
1
kpkpp QQC 1
1
![Page 18: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/18.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Bayesian inference: variance components
Multiple Sparse Priors(MSP)
…
# dipoles
# d
ipo
les
Minimum Norm(IID)
Maximum Smoothness(LORETA)
kpkpp QQC 1
1
![Page 19: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/19.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Bayesian inference: iterative estimation scheme
M-step estimate while keeping constants
E-step estimate while keeping constants,J
Expectation-Maximization (EM) algorithm
J,
![Page 20: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/20.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Bayesian inference: model comparison
)()()|(log McomplexityMaccuracyMYpF
model Mi
Fi
1 2 3
At convergence
![Page 21: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/21.jpg)
OutlineEEG/MEGEEG/MEG
Source localisationSource localisation
1. Introduction
2. Forward model
3. Inverse problem
4. Bayesian inference applied to the EEG/MEG inverse problem
5. Conclusion
![Page 22: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/22.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Conclusion: At the end of the day...
Somesthesic data Bilateral auditory tone
![Page 23: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/23.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Conclusion: At the group level...
RL
Individual reconstructions in MRI template space
Group resultsp < 0.01 uncorrectedR L
![Page 24: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/24.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Conclusion: Summary
• Prior information is mandatory
• EEG/MEG source reconstruction:1. forward model2. inverse problem (ill-posed)
• Bayesian inference is used to:1. incorpoate such prior information…2. … and estimating their weight w.r.t the data3. provide a quantitative feedback on model adequacy
Forwardmodel
Inverseproblem
![Page 25: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/25.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
source biophysical model: current dipole
EEG/MEG source models
EquivalentCurrent
Dipoles (ECD)
Imaging orDistributed
Equivalent Current Dipole (ECD) solution
few dipoles with free
location and orientation
many dipoles with fixed location and orientation
![Page 26: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/26.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation ECD approach: principle
EJfY
Forwardmodel
data dipoleparameters
noiseforwardoperator
but a priori fixed number of sources considered iterative fitting of the 6 parameters of each dipole
![Page 27: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/27.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
The locations s and moments w are drawn from normal distributions with precisions γs and γw.
E is white observation noise with precision γy.
w s
Y
w s
yThese are drawn from a prior gamma distribution.
EwsgEJfY )()(
Dipole J with location s and moment w
generated data Y using
ECD solution: variational Bayes (VB) approach
![Page 28: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/28.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation ECD solution: “classical” vs. VB approaches
“Classical” VB
Hard constraints Yes Yes
Soft constraints No Yes
Noise accommodation
No (in general)
Yes
Model comparison
No YES
![Page 29: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/29.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
• can be applied to single time-slice data or average over time (MEG and EEG)
• useful for comparing several few-dipole solutions for selected time points (N100, N170, etc.)
• although not dynamic, can be used for building up intuition about underlying generators, or using as a motivation for DCM source models
• implemented in Matlab and available in SPM8b
ECD solution: when and how to apply VB-ECD?
![Page 30: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/30.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Example 1: somestesic stimulation
Scalp distribution, 21ms post-stimulus
ERP data over 64 channels VB-ECD solution
![Page 31: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/31.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation Example 2: auditory oddball
Oddball stimuli Standard stimuli
Scalp potential for auditory stimulations
![Page 32: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/32.jpg)
Main referencesEEG/MEGEEG/MEG
Source localisationSource localisation
Litvak and Friston (2008) Electromagnetic source reconstruction for group studies
Friston et al. (2008) Multiple sparse priors for the M/EEG inverse problem
Kiebel et al. (2008) Variational Bayesian inversion of the equivalent current dipole model in EEG/MEG
Mattout et al. (2007) Canonical Source Reconstruction for MEG
Daunizeau and Friston (2007) A mesostate-space model for EEG and MEG
Henson et al. (2007) Population-level inferences for distributed MEG source localization under multiple constraints: application to face-evoked fields
Friston et al. (2007) Variational free energy and the Laplace approximation
Mattout et al. (2006) MEG source localization under multiple constraints
Friston et al. (2006) Bayesian estimation of evoked and induced responses
Phillips et al. (2005) An empirical Bayesian solution to the source reconstruction problem in EEG
![Page 33: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/33.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
![Page 34: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/34.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
),0(~),( CNMJp
)exp(kk
),(~ Nk
- Log-normal hyperpriors- Enforces the non-negativity of the hyperparameters- Enables Automatic Relevance Determination (ARD)
Bayesian inference: multiple sparse priors
![Page 35: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/35.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
SubjectsMRI Anatomical warping
Corticalmesh
Canonicalmesh
[Un]-normalisingspatial transformation
MNI Space
Forward model: canonical mesh
![Page 36: EEG/MEG Source Localisation SPM Course – Wellcome Trust Centre for Neuroimaging – Oct. 2008 ? ? Jérémie Mattout, Christophe Phillips Jean Daunizeau Guillaume.](https://reader036.fdocuments.us/reader036/viewer/2022081516/56649ef25503460f94c04027/html5/thumbnails/36.jpg)
EEG/MEGEEG/MEGSource localisationSource localisation
From Sensor to MRI space
MRI derived meshes
MEG
Full setup
EEG
RigidTransformation
HeadShape
SurfaceMatching
+
HeadShape
Forward model: coregistration