Dna computing

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  • 1.DNA COMPUTING Presented by:~ Abhiroop Roy Chowdhury Aditi Roy Affan Ahmed Amit Singh Ananya Roy Aniket Biswas Anirban Nag

2. Little about DNA & DNA Computing Logical Operations in DNA Computer Adlemans Hamiltonian path solution DNA chips vs. Silicon chips Advantages Application & limitations Future Prospects Conclusion GNIT, IT, 3RD YEAR 3. Double stranded helical staircase structure Adenine (A) + Thymine (T) Guanine (G) + Cytosine (C) Biological technique as efficient computing vehicle Data are represented using strands of DNA GNIT, IT, 3RD YEAR INTRODUCTION 4. Logical operators AND, OR, NOT = DNA cutting, copying, pasting Enzymes function simultaneously Massive parallelism GNIT, IT, 3RD YEAR 5. DNA chips VS Silicon chips DNA chips Parallel processing Increased memory capacity=>better performance cheap due to easy availabilty Silicon chips Sequential processing Increased CPU speed=>better performance Relatively costlier GNIT, IT, 3RD YEAR 6. A directed graph with N vertices and E edges A fixed start(S ) and target(T ) vertex A path from S to T With no vertex repeating Having exactly N vertices GNIT, IT, 3RD YEAR HAMILTONIAN PATH PROBLEM S T 7. GNIT, IT, 3RD YEAR 8. 1. Generate Random paths GNIT, IT, 3RD YEAR ALGORITHM 9. GNIT, IT, 3RD YEAR 2. Keep paths starts from S to T 3. Keep only those that visit exactly N vertices Contd.. 10. GNIT, IT, 3RD YEAR 4. Keep only those that visit each vertex only once 5. If any DNA sequence remains then a path exists 6. Otherwise no path exist Contd.. 11. Cellular organisms Supply of DNA. Large supply of DNA - Cheap resource DNA performs error correction Smaller than today's computers, large storage GNIT, IT, 3RD YEAR ADVANTAGES 12. GNIT, IT, 3RD YEAR ADVANTAGES 1 gram of DNA = 13. DNA Fingerprinting Pharmaceutical Applications Adlemans experiment took over 7 days to end The experiment will fail for 200 or more cities GNIT, IT, 3RD YEAR APPLICATIONS & LIMITATIONS 14. IBM seeks a fusion of DNA & Silicon Biologists are researching implementation of DNA Computer to human cells killer app-domain of DNA2DNA application GNIT, IT, 3RD YEAR FUTURE PROSPECTS 15. GNIT, IT, 3RD YEAR o logical game development Tic-Tac-Toe o Cryptography o Planning efficient airline routes o Helps in implementing molecular computation CONCLUSION 16. [1] Intelligent Computing Everywhere Schuster, Alfons (Ed.), ISBN 978-1- 84628-943-9,2007 [2] Adleman, L. M. (1994). "Molecular computation of solutions to combinatorial problems". Science 266 (5187): 10211024 [3] www.cdn-5.freeclipartnow.com [4] www.idmarching.com [5] NPTEL Videos GNIT, IT, 3RD YEAR References