DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture •...

13
2019.03.18. 1 DISEASES CAUSED BY ESCHERICHIA COLI 1 Diseases caused by Escherichia coli Aetiology: Escherichia coli Enterobacteriaceae family Gram-negative lactose positive antigens: O: LPS (181), endotoxin K: polysaccharide (60) H: protein (53) F: protein (30) F1-F18, F41, etc. 2 normal inhabitant of the large intestine normal flora, vitamin production, activation of the immune system pathogenicity mainly saprophyte, some facultative pathogenic strains virulence factors capsule endotoxin adhesins toxins invasive ability ability of survival in blood genetic variability 3 virulence factors adhezins: fimbria human: F2, F3 calves: F5, F17, F41 pigs: F4, F6, F18 urogenital: F7-F16 outer membrane proteins intimin fibronectine receptors 4 virulence factors toxins o enterotoxins LT: cAMP ST:, cGMP (dehydration, metabolic acidosis) o cytotoxins verotoxins SLT / VT1, VT2: inhibition of protein synthesis: endothel damage, necrosis cytotoxic necrotic factor (CNF) cytolethal distending toxin (CDT): urogenital, extra intestinal alpha-haemolysin: pore forming toxin invasive ability survival in the blood (siderophors) 5 Pathotypes of E. coli I. Enteric Enterotoxigenic (ETEC) diarrhoea in suckling animals, newborn children, travellers enterotoxins, fimbria Enteropathogenic (EPEC) dyspepsia of newborns intimin, damage of microvilli Enterohaemorrhagic /Verotoxigenic (EHEC/VTEC) haemorrhagic colitis, haemolytic-uraemic syndrome intimin, verotoxins Enteroinvasive (EIEC) humans, dysentery-like Enteroadhesive-aggregative (EAEC): mild enteritis humans Combined types: EHEC/EAEC Germany 2011 O104:H4 6

Transcript of DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture •...

Page 1: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

1

DISEASES CAUSED BY

ESCHERICHIA COLI

1

Diseases caused by Escherichia coli

Aetiology:

• Escherichia coli

• Enterobacteriaceae family

• Gram-negative

• lactose positive

• antigens:

• O: LPS (181), endotoxin

• K: polysaccharide (60)

• H: protein (53)

• F: protein (30)

• F1-F18, F41, etc.2

• normal inhabitant of the large intestine

• normal flora, vitamin production, activation of the immune system

• pathogenicity

• mainly saprophyte,

• some facultative pathogenic strains

• virulence factors

• capsule

• endotoxin

• adhesins

• toxins

• invasive ability

• ability of survival in blood

• genetic variability3

• virulence factors

• adhezins:

• fimbria

• human: F2, F3

• calves: F5, F17, F41

• pigs: F4, F6, F18

• urogenital: F7-F16

• outer membrane proteins

• intimin

• fibronectine receptors

4

• virulence factors

• toxins

oenterotoxins

� LT: cAMP ↑↑↑↑

� ST:, cGMP ↑↑↑↑ (dehydration, metabolic acidosis)

ocytotoxins

� verotoxins

• SLT / VT1, VT2:

• inhibition of protein synthesis: endothel damage, ne crosis

� cytotoxic necrotic factor (CNF)

� cytolethal distending toxin (CDT): urogenital, extra intestinal

� alpha-haemolysin: pore forming toxin

• invasive ability

• survival in the blood (siderophors) 5

Pathotypes of E. coli I. Enteric

• Enterotoxigenic (ETEC)

• diarrhoea in suckling animals, newborn children, tr avellers

• enterotoxins, fimbria

• Enteropathogenic (EPEC)

• dyspepsia of newborns

• intimin, damage of microvilli

• Enterohaemorrhagic /Verotoxigenic (EHEC/VTEC)

• haemorrhagic colitis, haemolytic-uraemic syndrome

• intimin, verotoxins

• Enteroinvasive (EIEC)

• humans, dysentery-like

• Enteroadhesive-aggregative (EAEC): mild enteritis h umans

• Combined types: EHEC/EAEC Germany 2011 O104:H4 6

Page 2: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

2

7

Enterotoxigenic and enteropathogenic E. coli

strains (Dr. B. Nagy)

Pathotypes of E. coli II.

Extra intestinal

• Urogenital

• adhesin (F7-16),

• toxins: CNF, CDT, alpha-haemolysin

• Septicaemia, meningitis

• newborn children, old people, immune compromised pe ople

• colicin-V plasmid, alpha-haemolysin

8

Diseases of animals caused by E. coli

• Enteric diseases

• calves (ETEC, VTEC)

• piglets (ETEC, VTEC, EPEC)

• rabbits (EPEC)

• dogs, cats (ETEC, VTEC, EPEC)

• Septicaemic diseases

• calves

• poultry

• Urinary tract infection, mastitis

• cows,

• sows: MMA

9 10

Epidemiology

• infection

• faeces, feed, water contaminated with faeces

• egg: germinative

• predisposing factors

• insufficient feeding of pregnant cows, weak calves

• insufficient colostrum supply

• overcrowding

• stable (temperature, humidity, etc.)

• nutritional deficiencies

• hygiene problems

11

Pathogenesis

• infection

• asymptomatic presence in the gut

• predisposing factors

• replication in gut

• production of enterotoxins

• diarrhoea

• production of verotoxins

• haemorrhages, oedema

• septicaemia

• endotoxin effect

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• bacteriology:

• isolation and identification of E. coli: pure culture

• identification of the serotype (O-K-H-F)

• identification of the virulence factors

• adhesins (agglutination, PCR)

• toxins (isolated gut test, PCR)

• examination of antibiotic susceptibility

12

Page 3: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

3

Treatment

• enteric diseases

• per os antibiotics

• polymyxins, quinolons, aminoglycosides, broad spect rum

ββββ-lactame antibiotics: amoxicillin, cephalosporins

• rehydration

• septicaemia

• parenteral

• generally late

• mastitis

• quinolons, aminoglycosides

• antibiotic resistance

13

Prevention

• predisposing factors

• correct feeding of pregnant animals

• good nutrition and management

• hygiene

• specific prevention

• colostrum

• supply in time

• quality (presence of appropriate antibodies)

• quantity

• vaccination

• mainly in the case of neonatal diseases

• probiotics: Lactobacillus, Enterococcus, Bifidobacterium

• prebiotics: feed additives 14

DISEASES CAUSED BY E. COLI IN CATTLE

1. Coli septicaemia of calves

2. Coli diarrhoea of calves

3. Calf dysentery

4. Mastitis

15

COLI SEPTICAEMIA OF CALVES

Occurrence

• sporadic

Aetiology

• septic (invasive) E. coli strains (O78:K80), F17

• no toxin production

• survival in blood (siderophors, iron binding protei ns)

Epidemiology

• first week of life

• predisposing factors

• hypo-gammaglubulinaemia (agamma-globulinaemia)

• navel infection

16

Pathogenesis

• infection

• per os

• umbilical

• pharynx lymphoid tissues ( →→→→ blood)

• gut ( →→→→ blood)

• septicaemia

• endotoxin effect

17

Clinical signs

• fever , anorexia, depression

• weakness

• diarrhoea is not typical

• meningitis, pneumonia

• dies within 1-2 days

Post mortem lesions

• haemorrhages

• enlarged lymph nodes

• pericarditis, perihepatitis (fibrinous)

• peritonitis

18

Page 4: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

4

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• isolation of the agent from

• parenchymal organs

• blood

19

Treatment

• parenteral antibiotics

• generally late

Prevention

• hygiene

• colostrum

• optimal nutrition of the pregnant cows

• check the level of immunoglobulins in newborn calve s

• disinfection of the navel

20

COLI DIARRHOEA OF CALVES

Occurrence

• widespread

Aetiology

• enterotoxigenic E. coli

• fimbria: F5, F17, F41

• ST toxin

21

Epidemiology

• more frequent in large scale farms

• at the end of the winter

• 2-4-day-old

• predisposing factors

• overcrowing

• cold, wet stable

• colostrum supply (but cannot completely prevent)

• insufficient nutrition of cowsPathogenesis

• per os infection

• colonisation, toxin production

• diarrhoea, fluid loss

22

Clinical signs

• no fever

• anorexia, depression

• diarrhoea (yellow, stinking)

• dehydration

• in case of sufficient colostrum supply clinical sign s are milder

23 24

Post mortem lesions

• exsiccosis

• stomach, gut filled

Page 5: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

5

Coli diarrhoea in calf

25

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• isolation of the agent

• detection of the virulence factors

• detection of fimbriae

• detection of enterotoxin

• serotyping

• differential diagnosis

• rotavirus

• coronavirus

• cryptosporidiosis

26

Treatment

• per os antibiotics

• rehydration

Prevention

• hygiene, disinfection

• good nutrition of the pregnant cows

• colostrum

• isolation (individual cages, moving)

• vaccination: cows

• bacterins

• inactivated toxin

• combined vaccines

27

CALF DYSENTERY CAUSED BY VEROTOXIGENIC E. COLI

Occurrence

• sporadic

Aetiology

• verotoxigenic E. coli (VTEC/EHEC)

• VT1, VT2

• O157:H7

Epidemiology

• subclinical infection is common

• cows do not show signs but carry the agent (1-3%)

• carriage by calves 5-15%

• public health importance 28

Pathogenesis

• per os infection

• small amount of bacteria is enough

• replication in the large intestine

• damage of the microvilli

• production of verotoxins (VT1, VT2)

Clinical signs

• 2-8 weeks of age

• chronic diarrhoea (brownish, reddish, cream-like)

• can recover spontaneously

29

Post mortem lesions

• large intestine

• hyperaemia

• haemorrhages

Diagnosis

• bacterium isolation, serotyping

• detection of the toxin

• differential diagnosis

• coccidiosis

• coronavirus

• cryptosporidiosis

30

Page 6: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

6

Treatment

• oral bacteriostatic antibiotics

• bactericid ones can help release of the toxin

• rehydration

31

DISEASES CAUSED BY E. COLI IN SWINE

• Coli diarrhoea of newborn piglets

• Coli diarrhoea of weaned piglets

• Oedema disease

• Other diseases caused by E. coli

• coli-septicaemia

• mastitis, metritis,

• cystitis, pyelonephritis

32

COLI DIARRHOEA OF NEWBORN PIGLETS

Occurrence

• worldwide

• large scale farms

Aetiology

• enterotoxigenic E. coli

• virulence factors

• fimbria: F4, F6, (F5)

• enterotoxins: LT, STa, STb

33

Epidemiology

• appears in different litters

• more frequent in litters of first farrowing sows

• some litters are resistant

• absence of receptors, dominant inheritance

• it can be seen even in the case of good colostrum s upply

• predisposing factors:

• age,

• overcrowding, cold, wet stable, hygiene problems

• nutritional deficiencies,

• low body weight

• 0-10 days of age

34

Pathogenesis

• per os infection

• replication in the gut

• adhesion by fimbria

• toxin production

• diarrhoea, dehydration

• shedding in faeces

• susceptibility is decreasing with age

• weaker binding to older epithelial cells

• decreased susceptibility of epithelial cells to ent erotoxins

35

Clinical signs

• good appetite

• depression

• no fever

• diarrhoea (yellow faeces)

• dehydration

Post mortem lesions

• stomach filled with clotted milk

• gastric mucosa is reddish

• gut is flaccid

Coli diarrhoea (NADIS)36

Page 7: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

7

Coli diarrhoea of suckling piglets37

Coli diarrhoea, full stomach (NADIS)

38

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• isolation of the agent: gut, mesenthelial lymph nodes , (organs)

• identification of the virulence factors

• differential diagnosis

• necrotic enteritis of suckling piglets

• TGE

• rotavirus

• coccidium

39

Treatment

• oral antibiotics

• whole litter has to be treated

• rehydration

Prevention

• hygiene

• predisposing factors

• colostrum

• mixing first farrowing and old sows before farrowin g

• all-in-all-out

• vaccination

• inactivated strains with fimbria

• inactivated LT

• pregnant sows have to be vaccinated 40

COLI DIARRHOEA OF WEANED PIGLETS

Occurrence

• worldwide

Aetiology

• ETEC strains

• virulence factors:

• fimbria

• F4,

• F18ac (susceptibility is increasing with age)

• sometimes VTEC and CNF producing strains

41

Epidemiology

• intensive feeding

• predisposing factors

• stress caused by weaning

• nutrition: sudden change of the diet, overeating

• transportation, reallocation

• slow adaptation of the gastrointestinal tract

• viruses: rota, corona, calici

42

Page 8: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

8

Pathogenesis

• the causative agent is present in the gut

• increased susceptibility to F18ac fimbria

• changes in the gut flora

• shortening of the microvilli

• overeating (high protein)

• insufficient production of enzymes

• slow peristaltic movement

• gastroenteritis

43

Clinical signs

• 1-2 weeks after weaning

• diarrhoea

• smell: undigested protein

• VTEC, CNF-producing strains

• haemorrhagic faeces

• uneven stock

• decreased weight gain

Post mortem lesions

• gastritis, enteritis

• mesentherial lymph nodes enlarged

44

Coli-diarrhoea of weaned piglets

45

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• bacterium isolation

• characterisation of the bacterium

• characterisation of virulence factors

Treatment

• decreased portion

• increased fibre content

• antibiotics in the water

• rehydration

46

Prevention

• improved hygiene

• decreased portion, increased fibre content

• gradual change of diet

• probiotics, prebiotics

• vaccines

• fimbriated strains

• attenuated strains

• limited effect, they are generally not used

47

OEDEMA DISEASE

Occurrence

• mainly small farms

• sometimes large farms, too

Aetiology

• verotoxigenic E. coli strains

• virulence factors

• verotoxin (VT2v)

• F18ab fimbria

48

Page 9: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

9

Epidemiology

• sporadic

• mainly 1-2 weeks after weaning

• predisposing factors:

• weaning

• sudden change of diet

• high protein content of the food

49

Pathogenesis

• VTEC replication in the gut

• toxin production

• absorption of the toxin (enterotoxaemia)

• inhibition of protein synthesis, cell death

• damage of small arteries (microangiopathy),

• permeability increased

• oedema

• irreversible

50

Clinical signs

• oedema

• sub cutaneously

• nose,

• ear

• eye

• ataxia

• flaccid paralysis

• dyspnoe

• sudden death

• no fever

• no diarrhoea

• 100% die51 52

Post mortem lesions

• stomach filled

• oedema (stomach, mesentherium, gut, lungs, brain)

Oedema disease

53

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• bacterium isolation

• verotoxin production (PCR, Vero cells)

• serotyping

• differential diagnosis

• Aujeszky disease

• Teschovirus encephalomyelitis

• streptococcosis

• Glässer’s disease

• toxicosis

54

Page 10: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

10

Treatment

• diseased:

• not feasible (antibiotics, antihistamines)

• penmates:

• per os antibiotics, laxants

Prevention

• decreased portion, increased fibre content

• gradual change of feed

• antibiotics in feed

• vaccines

• fimbriated but not toxin producing strains

• inactivated toxin (not on the market)

55 56

DISEASES OF SHEEP AND GOATS CAUSED BY E. COLI

• coli septicaemia (watery mouth)

• coli -diarrhoea

• similar to the diseases of cattle caused by E. coli

E. COLI DIARRHOEA OF RABBITS

Occurrence

• worldwide

Aetiology

• enteropathogenic E. coli (EPEC)

• (there are no E. coli strains in the gut flora of rabbits)

Epidemiology

• mainly large farms

• insufficient fibre content can predispose

• after weaning (5-12 weeks old)

57

Pathogenesis

• decreased fibre content

• decreased volatil acid concentration

• elevated pH

• E. coli can replicate in the gut

• adhesion to the distal small intestine and the larg e intestine

• damage of the microvilli

• decreased absorption

58

Clinical signs

• diarrhoea (mucous, watery)

• anorexia

• death

Post mortem lesions

• stomach filled

• enteritis (foamy)

• oedema in the gut wall

• haemorrhages in the gut

59

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• isolation of E. coli (gut, mesentherial lymph nodes)

• differential diagnosis

• coccidiosis

• rotavirus

Treatment

• per os antibiotics (colistin, enrofloxacin)

• coccidiostatics

Prevention

• high fibre, low protein content of feed

• gradual change of the food

• no vaccine on the market (only trial)60

Page 11: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

11

DISEASES OF DOGS AND CATS CAUSED BY E. COLI

• sporadic

• enteritis:

• suckling and young animals, ST producing E. coli

• cat: haemorrhagic enteritis (VTEC)

• urogenital infections

• treatment:

• antibiotics

61

DISEASES OF HORSES CAUSED BY E. COLI

• sporadic

• enteral disease

• septicaemia (rare)

• hygiene

62

DISEASES OF POULTRY CAUSED BY E. COLI

Occurrence

• worldwide

Aetiology

• invasive E. coli strains

• virulence factors

• F11 fimbia, surface proteins etc.

• certain K-antigens

• cytotoxins (less frequent)

• virulence variants

63

Epidemiology

• infection

• horizontal: faeces, indirect infection, wounds

• vertical: eggs (germinative)

• predisposing factors

• management problems, overcrowding

• nutritional deficiencies

• new, high performance hybrids

• other infections: mycoplasma, viruses

• disease is influenced by

• virulence of the agent

• age,

• way of infection

• predisposing factors 64

Pathogenesis

• infection

• embryonic infection (germinative, eggshell)

• death or weak chicken with omphalitis will be hatch ed

• inhalation (hatchery)

• replication in the respiratory ways, local lesions (airsacculitis)

• percutaneous: cellulitis

• per os

• replication in the gut

• septicaemia

• endotoxin effect, damage of the endothelial cells

• parenchymal organs, serous membranes inflammation

65

Pathogenesis

• septicaemia

• young

• endotoxin effect, death

• grower, adult

• pericarditis, perihepatitis, airsacculitis, arthrit is

• hen

• coli-granulomatosis:

• liver, gut: inflammatory granuloma around E. coli

• death

66

Page 12: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

12

Clinical signs

• day-old chicken (septicaemia)

• omphalitis

• delayed absorption of the yolk sack

• anorexia

• diarrhoea

• die

• growers, adults

• septicaemia

• depression, anorexia, listlessness

• local lesions

• dyspnoe, respiratory signs

• arthritis

• cellulitis 67

Post mortem lesions

• day-old chicken

• omphalitis

• enteritis, haemorrhages

• fibrinous pericarditis

• growers, adults

• septicaemia (haemorrhages, enlarged parenchymal org ans)

• chronic form

• airsacculitis

• peritonitis

• fibrinous pericarditis, perihepatitis

• salpingitis

• granulomas: skin, ovarium, gut68

E. coli infection in poultry

69

E. coli infection in adults(septicaemia, salpingitis,

granulomatosis)

70

E. coli infection in adults(air sacculitis, cellulitis)

71

Diagnosis

• epidemiology – clinical signs – post mortem lesions

• bacteriological examination (isolation from bone ma rrow)

• identification of the primary agent

• differential diagnosis

• salmonellosis

• mycoplasmosis

• infectious bursitis

• infectious anaemia

72

Page 13: DISEASES CAUSED BY ESCHERICHIA COLI• isolation and identification of E. coli: pure culture • identification of the serotype (O-K-H-F) • identification of the virulence factors

2019.03.18.

13

Treatment

• antibiotics in water

• treatment of the primary problem

Prevention

• prevention of early mass infection

• rules of egg collection and hatching are kept

• hygiene, disinfection

• all in all out

• probiotics, prebiotics

• vaccines

• inactivated vaccines

• poor heterologous protection

73

Public health aspects

• generally not zoonosis except VTEC/EHEC

• babies:

• coli diarrhoea,

• septicaemia

• adults:

• travellers’ diarrhoea

• urinary tract infections

• haemorrhagic enterocolitis

• haemolytic uraemic syndrome

74

Public health aspects

Aetiology

• VTEC/EHEC

• CNF producing strains

Epidemiology

• cattle are frequently asymptomatic carriers

• milk, meat, contact, faeces

• dung, food irrigated with sewage water

• small amount of bacteria is enough

• all age groups especially children and elderly are susceptible

• lethality: children (5-10%) and elderly (5-50%)

75

Pathogenesis

• damage of endothelial cells

• haemolytic-uraemic syndrome

Clinical signs

• abdominal pain, haemorrhagic diarrhoea

• haemorrhagic faeces

• damaged kidney function

Treatment :

• electrolyte,

• symptomatic treatment

Prevention :

• hygiene

• do not consume row milk, meat76