Disease spreading & control in temporal networks
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Transcript of Disease spreading & control in temporal networks
Disease spreading & control in temporal
networks
Petter Holme, Umeå University & SKKUin KAIST Dec 14, 2010
with Luis EC Rocha, Sungmin Lee, Fredrik Liljeros
Temporal structures
6,7,9
BC
1,2,4,511
10,15
Atime
What we are interested in
• How does temporal structures in empirical networks affect disease spreading?
• Can we exploit these structures to slow down disease spreading?
Our datasets
• E-mail: 3,188 nodes, 309,125 contacts over 83 days
• Internet dating: 29,341 nodes, 536,276 contacts over 512 d
• Hospital: 295,107 nodes, 64,625,283 contacts over 8,521 d
• Prostitution: 16,730 nodes, 50,632 contacts
Avg. max speed vs. 0-model
SI model, vs ρ = 1
Outbreak diversity
Threshold in transmissivity
Threshold in duration
Contact seq vs other models
HIV, two-stage model
A society-wide context
Summary
• Temporal correlations speed up the outbreaks on a short time scale & slows it down on a longer time scale
• Temporal effects create distinct and comparatively high epidemic thresholds
• HIV can not spread in the prostitution data alone and probably does not serve as a reservoir of HIV in a society-wide
Temporal vaccination
Relative effic., worst case
f (%)
f (%) f (%)
20
10
0
–10
–20
2
0
–2
–4
0 20 40 60 80 0 20 40 60 80
1
0
–1
–2
2
–3
20
10
0
–10
–20
0 20 40 60 80 0 20 40 60 80
f (%)
D E-mailC Hospital
B Internet datingA ProstitutionΔS
(%
)Weight
Recent
ΔS (
%)
ΔS (
%)
ΔS (
%)
Relative effic., SIRΔs
(%
)
0.2
0.1
0
–0.1
–0.2
–0.3
Δs (
%)
10
5
0
–5
–10
–15
f (%)
0 20 40 60 80 0 20 40 60 80
f (%)
f (%)
0 20 40 60 80 0 20 40 60 80
f (%)
40
20
0
–20
10
5
0
–5
–10
–15
Δs (
%)
Δs (
%)
B Internet dating
C Hospital D E-mail
A Prostitution Weight
Recent
Parameter dep. rel. effic.
Explanatory model
Summary
• Temporal correlations do affect disease spreading and can be exploited in targeted vaccination
• The best vaccination strategy depends on the type of temporal structure
• Until more structural information is available, we recommend the strategy Recent
deadline March 10March 28 – April 20
nordita.org/network2011