Dies ist nur ein Beispielbild! Roquin binds inducible costimulator (ICOS) mRNA and effectors of mRNA...
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Transcript of Dies ist nur ein Beispielbild! Roquin binds inducible costimulator (ICOS) mRNA and effectors of mRNA...
![Page 1: Dies ist nur ein Beispielbild! Roquin binds inducible costimulator (ICOS) mRNA and effectors of mRNA decay to induce microRNA-independent post-transcriptional.](https://reader036.fdocuments.us/reader036/viewer/2022062511/551535d355034673228b59c0/html5/thumbnails/1.jpg)
Dies ist nur ein Beispielbild!Roquin binds inducible costimulator (ICOS) mRNA and
effectors of mRNA decay to induce microRNA-independent
post-transcriptional repression
Glasmacher et al., Nat Immunol. 2010 Aug;11(8):725-33
Kirstin Jurrat
Paper Presentation, 1st November 2010
ZIB
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Storybook
Seite 2 |
• Who is who• Degradation of mRNA
Introduction
• Repression• Essential roquin domains
Roquin controls ICOS mRNA
• P-body pathway• Role of stress granules• Decapping proteins• miRNA & Dicer & RISC
Details of repression
• Involved roquin domains• Binding position at ICOS mRNA
Interaction with ICOS mRNA
Summary & Discussion
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Introduction – Who is who
Seite 3 |
Inducible costimulator (ICOS)
• On surface of T-cells after antigen recognition
• Post-transcriptional regulation assumed
• Effect: regulation of cytokine production provides B-cells for
antibody production
Relationship of ICOS and roquin
• Roquin: CCCH-type zinc finger protein, destabilizes mRNA of
ICOS
• Loss of repression leads to autoimmunity (Rc3h1san/san mice)
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Post-transcriptional regulation of gene expression
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Depending on trans-acting factors binding to cis-
regulatory elements
microRNAs (miRNAs)
RNA-binding proteins
Coope-ration
&exclusion
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Open questions
Seite 5 |
ICOS repression by roquin
• Roquin: destabilizes mRNA of inducible costimulator (ICOS)
• Required: 3´untranslated region (3´UTR) of ICOS mRNA with putative
miRNA-binding site possible functional dependence of roquin on
miRNA
• miRNA
• Roquin-miRNA
• Roquin-miRNA-induced silencing complex
Questions
• how ICOS mRNA is recognized by roquin
• how recognition induces mRNA decay
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mRNA degradation
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Degradation of eukaryotic mRNA: Decapping & P-bodies
Seite 7 |
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ICOS expression is controlled by roquin
Seite 8 |
In TH cells: Expression of ICOS under post-
transcriptional control of roquin
- Primary CD4+ T cells from Tg(DO11.10)-Tg(CAR∆-1) mice: permissive
for adenoviral infection
- Adenoviral infection and activation with anti-CD3 and antiCD28
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Roquin domains needed for ICOS repression
Seite 9 |
Roquin (1-951): slightly less active than WT roquin
Roquin (1-509): inactivation of roquin-mediated ICOS repression
Superinfection of mouse embryonic fibroblasts (MEFs) with retrovirus
containing Thy-1.1 plus WT or mutant roquin
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Roquin interacts with the P-body pathway
Seite 10 |
No Stress
FMRP diffuse located no stress granulaGFP-roquin shows full colocalization with P-bodies
RNA-heli
case
P-b
odies
mar
ker p
rot.
for
stres
s gra
nules
Roquin
Overla
y
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Roquin interacts with the P-body pathway
RNA-heli
case
P-b
odies
mar
ker p
rot.
for
stres
s gra
nules
Roquin
Overla
y
After stress induction
Association with stress granules
Lost connection to P-bodies
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Roquin interacts with the P-body pathway
lost focus in absence of stress
still able to colocalize with stress granula after stress induction
GFP-roquin (1-749): missing Gln and Asn enriched sequences
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Seite 13 |
Expression of ICOS and
roquin in NIH3T3 cells
Roquin interacts with the P-body pathway
Roquin (1-749) impaired
of ICOS downregulation
Roquin interaction with P-body pathway independent of
stress granules?
Confirms correlation of roquin function with localization to P-bodies
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Seite 14 |
Roquin interaction with P-body pathway independent of stress granules?
Expression of ICOS and
roquin in WT and TIA-1
deficient MEFs
Roquin mediated repression of ICOS does not depend on Tia-1
function in absence of stress
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Looking for interaction partners: Co-Immunoprecipitation
Antigen binds to interaction partner
Protein A/G binds antibody
Antibody binds antigen
http://de.academic.ru
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Roquin interacts with decapping proteins
Seite 16 |
Insensitive to RNase treatment
mRNA independent
• Rck (essential for
decapping)
• Edc4 (decapping enhancer)
• Dcp1a (decapping activator)
Co-Immunoprecipitation of
roquin
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Roquin interacts with decapping proteins
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Model: roquin mediates silencing of ICOS through functional
and physical interaction with proteins of the decapping
pathway
Knockdown of Rck ICOS expression increased
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Roquin-mediated repression does not require miRNA
Seite 18 |
Rck also essential in miRNA
dependent post transcriptional
signaling
influence of miRNA on roquin-
mediated ICOS downregulation
to be checked
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Roquin-mediated repression does not require miRNA & Dicer
Seite 19 |
Experiment
- MEFs, WT and deficient in
endoribonuclease Dicer1 (Dicer1 fl/fl)
- retroviruses: ICOS & WT
roquin/roquin (1-509)
Results:
WT roquin downregulated ICOS
mRNA in WT and Dicer-deficient
cells
downregulation similar ratesroquin induced similar decrease of ICOS mRNA expression
in WT and Dicer-deficient cells
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Roquin-mediated repression does not require miRNA & Dicer
Seite 20 |
roquin down-
regulation of ICOS mRNA is
Dicer independent
ICOS and Hoxc8 mRNA expression measured
MEFs (WT &
Dicer
deficient)
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Roquin-mediated repression does not require RISC
Seite 21 |
Embryonic stem cells
B9: Ago1-, Ago3-, Ago4-
E7: Ago1-Ago4-, transgenic Ago2
adenoviral coinfection of ICOS 3´UTR with GFP-CTRL or GFP-roquin
Roquin dependent ICOS repression independent of central RISC components
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Roquin is an RNA-binding protein
Immunoprecipitation of Roquin shows
Roquin is directly binding to ICOS mRNA
binding via ROQ domain in collaboration with CCCH-
type zinc finger
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Electrophoretic mobility shift assay
Seite 23 |
http://www.biochem.arizona.edu
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Binding position of roquin to ICOS mRNA
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Electrophoretic mobility shift assay
roquin interacts with Full-length ICOS mRNA
indicates several binding sites of roquin at ICOS mRNA
3´UTR at ICOS mRNA essential for roquin binding
significant region between 100 and 200 basepairs 3´of stop codon
the longer the 3´UTR the stronger is repression by roquin
further indication for more than one binding site at 3´UTR
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Summary & Discussion
- in TH cells: expression of ICOS under post-transcriptional control of
roquin
- roquin (1-509): inactivation of roquin-mediated ICOS repression
- roquin interacts with the P-body pathway via Gln/Asn rich regions
(roquin (1-749)) and independent of stress granules
- roquin interacts with decapping proteins independent of mRNA
- roquin-mediated repression does not require miRNA, Dicer and
RISC complex
- roquin binds with N-term. directly to 3´UTR of ICOS mRNA at
several binding position
Seite 25 |
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Thank you for your attention!
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Literature
Presentation based on:
Roquin binds inducible costimulator mRNA and effectors of mRNA decay to induce microRNA-
independent post-transcriptional repression.
Glasmacher E, Hoefig KP, Vogel KU, Rath N, Du L, Wolf C, Kremmer E, Wang X, Heissmeyer V.
Nat Immunol. 2010 Aug;11(8):725-33. Epub 2010 Jul 18.
Further literature:
Polysomes, P bodies and Stress granules: States and Fates of Eukaryotic mRNAs
Vidya Balagopal and Roy Parker*
Curr Opin Cell Biol. 2009 June ; 21(3): 403–408. doi:10.1016/j.ceb.2009.03.005.
Seite 27 |