Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially...

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Determination of Amino Acid Composition using Automated Pre-Column Derivitization and Superficially Porous Columns 1

Transcript of Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially...

Page 1: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Determination of Amino Acid Composition using Automated Pre-Column Derivitization and Superficially Porous Columns

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Page 2: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Some Basics

Amino Acids are the building blocks of proteins

Amino Acids require derivatization to be detected by UV or FL- OPA/FMOC, Ninhydrin, Dansyl chloride, and PITC are common reagents used

Derivatization can be done pre-column or post column- OPA/FMOC, Dansyl chloride, and PITC are common reagents used for pre-column

- Ninhydrin is common for post column methods

Analysis of AA can be done by several methods:- GC, CE, HPAE-PAD

- LC/UV/FL, LC/MS

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Page 3: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Why is Amino acid analysis important?

• Important for protein and peptide identification and quantitation

• Part of reverse-phase characterization in biopharma

• Required by the FDA

• Important for monitoring cell culture media

• Used for the analysis of metabolic intermediates - “Bound vs. Free”

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Page 4: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

The Agilent Amino Acid Analysis solution

4

Ready to use AdvanceBio AAA kit

(Standards and Reagents)

All Agilent LC systems including Infinity II systems

AdvanceBio AAA Columns

Fast and rugged

2.7µm

0.5µm

1.7µm

For Research Use Only. Not for use in diagnostic procedures

Page 5: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Agilent AdvanceBio AAA

Previous Agilent AAA Method

Agilent has a well established solution for Amino Acid Analysis

- based on automated pre-column derivatization capabilities of Agilent Autosamplers

- Uses ZORBAX Eclipse AAA column

- Well established method using reagents and standards from Agilent

What’s New?

- All reagents conveniently kitted together under a single part number

- Introduced an HpH chemistry on a Poroshellparticle for improved column lifetime

- Traditional silica columns dissolve above neutral pH, but HpH chemistry stabilizes column

• AA derivatization and separation are most efficient at higher pH

- Poroshell column with 2 µm frits is less susceptible to clogging

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For Research Use Only. Not for use in diagnostic procedures

Page 6: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Pre- vs Post-Column DerivatizationPost Column Derivatization - The historic Gold Standard of dedicated Amino Acid Analyzers

DerivatizationPump Autosampler Detector

Cation exchange

Ninhydrin or

Fluorescamine orOPA

UV/Vis

FLD

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Pre Column Derivatization - Offline:

Pump Detector

Reversed Phase

UV or FLD

Derivatization

Autosampler

Derivatization done offline, either manually or with separate automation,

and samples are transferred to autosampler

Pre Column Derivatization - Online:

Pump

Autosampler

DerivatizationDetector

Reversed Phase

Derivatization done online, in the autosampler – eliminates error associated with manual sample handling for highly consistent,

reproducible results

UV or FLD

For Research Use Only. Not for use in diagnostic procedures

Page 7: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

AdvanceBio AAA Reagent Kit

Part Number Material

5061-3339 100mL Borate Buffer

5061-3337 FMOC reagent - 10 ampoules, 1 mL each

5061-3335 OPA reagent, 10 mg/mL, 6 ampoules

5062-2479 Dithiodiproprionic acid (DTDPA)

5061-3330 AA, standard 1nmol 10/PK

5061-3331 AA standards, 250 pmol 10/PK

5061-3332 AA standards, 100 pmol 10/PK

5061-3333 AA standards, 25 pmol 10/PK

5061-3334 AA standards, 10 pmol 10/PK

5062-2478 AA supplements, 1g each

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Order components individually, or together as part of a kit with a single part number (5190-9426)

Page 8: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Automated Derivatization in the Autosampler

RR’NH

+ or

RNH2

- HCl

Room TemperatureNRR’

or

NHR

Fluorescence: Ex 260nm, Em 325nm

DAD: 262, 16nm; Ref. 324,8nm

+RNH2

R’SH

Room Temperature

Fluorescence: Ex 340nm, Em 450nm

DAD: 338, 10nm; Ref. 390, 20nm

H

H

O

O

NR

SR

Non-fluorescent

Does not absorb at 338nm

Fluorescent

Absorbs at 262nm and

Fluorescences at 324nm

Optimal pH for reaction with AA: ~10.0

1. Allows visualization by UV or FL

2. Helps retain very polar compounds

Ortho Phthalaldehyde (OPA)

Fluorenylmethoxychloroformate (FMOC)

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For Research Use Only. Not for use in diagnostic procedures

Page 9: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Online derivatization/Injection program

• Draw 2.5 µL from borate vial (Agilent p/n 5061-3339)

• Draw 1.0 µL from sample vial

• Mix 3.5 µL in wash port 5 times

• Wait 0.2 min

• Draw 0.5 µL from OPA vial (Agilent p/n 5061-3335)

• Mix 4.0 µL in wash port 10 times default speed

• Draw 0.4 µL from FMOC vial (Agilent p/n 5061-3337)

• Mix 4.4 µL in wash port 10 times default speed

• Draw 32 µL from injection diluent vial

• Mix 20 µL in wash port 8 times

• Inject

• Wait 0.1 min

• Valve bypass

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1290 Infinity II Multisampler

1260 Infinity II Vialsampler

Method can be programmed into ANY Agilent autosampler –

- Eliminates manual labor and variability- Enables highly precise data

Page 10: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Robust Columns for AAA

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• 2.7 µm particles, 110 Å pore size

• Two dimensions available: 3.0 x 100 mm, 4.6 x 100 mm

• Guard columns also available in each i.d.

• Each individual column is tested for efficiency

• Each batch is tested with amino acid standards to ensure performance

A robust, high efficiency Fast LC column with resistance to elevated pH and

temperature offering users performance comparable to that of sub-2 µm alternatives

but with up to 50% less back pressure.

Core P120 Particle Treated P120

Utilizes a proprietarytechnology for particle synthesis

For Research Use Only. Not for use in diagnostic procedures

Page 11: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Chromatographic Method

• Flow rate – 1.5 mL/min for 4.6 mm and 0.62 mL/min for 3 mm i.d.

• Injection volume – 1µL with needle wash at the wash port for 7s

• Column temperature – 40 ºC

• Detection wavelength – 338 and 262nm

• Samples- Agilent AAA standards, media samples and protein hydrolysate standards

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Time (min) %B

0 2

0.35 2

13.4 57

13.5 100

15.7 100

15.8 2

18 stop

Page 12: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Fast and Rugged Amino Acids Separation

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DAD = 338 nm DAD = 262 nm

For Research Use Only. Not for use in diagnostic procedures

Page 13: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Order of Elution for OPA and FMOC derivativesPeak # AA Name AA Abbreviation Derivative Type

1 Asparic Acid ASP OPA

2 Glutamic Acid GLU OPA

3 Aspraragine ASN OPA

4 Serine SER OPA

5 Glutamine GLN OPA

6 Histidine HIS OPA

7 Glycine GLY OPA

8 Threonine THR OPA

9 Arginine ARG OPA

10 Alanine ALA OPA

11 Tyrosine TYR OPA

12 Cysteine CYS-CYS OPA

13 Valine VAL OPA

14 Methionine MET OPA

15 Norvaline* NVA OPA

16 Tryptophan TRP OPA

17 Phenylalanine PHE OPA

18 Isoleucine ILE OPA

19 Leucine LEU OPA

20 Lysine LYS OPA

21 Hydroxyproline HYP FMOC

22 Sacrosine (IS) SAR FMOC

23 Proline PRO FMOC

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Primary AA

Secondary AA

Page 14: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

min1 2 3 4 5 6 7 8 9

mAU

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100

200

300

400

*DAD1 A, Sig=338,10 Ref=390,20 (AAA FINAL\STD WITH NAN3\1BE-0201.D)

*DAD1 A, Sig=338,10 Ref=390,20, TT (AAA FINAL\STD WITHOUT NAN3\1BG-0401.D)

Glu

tam

ic a

cid

Asp

ara

gin

e

Se

rin

e

Glu

tam

ine

His

tid

ine

Gly

cin

e

Arg

inin

e

Ty

rosi

ne

Ala

nin

e

Cy

stin

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Va

lin

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Me

thio

nin

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No

rva

lin

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Try

pto

ph

an

Ph

en

yla

lan

ine

Iso

leu

cin

e

Leu

cin

e

Lysi

ne

Asp

art

ic a

cid

Th

reo

nin

e

Elution Profile with and without Sodium Azide

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• Historically NaN3 has been added to aqueous mobile phase to reduce bacterial growth.

• NaN3 is highly toxic.

• No effect on the separation.

• Highly recommend filtering mobile phases (0.45 or 0.2 µm) to reduce bacterial growth.

For Research Use Only. Not for use in diagnostic procedures

Page 15: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Reproducible Separations

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min2 4 6 8 10 12

mAU

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DAD1 A, Sig=338,10 Ref=390,20,

Glu

tam

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Asp

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Se

rin

e Glu

tam

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His

tid

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Arg

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Ty

rosi

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Ala

nin

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Cy

stin

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Va

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Me

thio

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No

rva

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e Try

pto

ph

an

Ph

en

yla

lan

ine

Iso

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cin

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Leu

cin

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Asp

art

ic a

cid

Th

reo

nin

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Lysi

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Hy

dro

xy

pro

lin

e

Sa

rco

sin

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Pro

lin

e

DAD = 338 nm DAD = 262 nm

1 nmol amino acid standards4.6 x 100 mm column

Amino Acids RT RSD (%) Area RSD (%)

1. Aspartic acid 1.270 1.066

2. Glutamic acid 0.973 1.85

3. Asparagine 0.605 1.79

4. Serine 0.629 1.82

5. Glutamine 0.470 1.56

6. Histidine 0.430 1.22

7. Glycine 0.477 1.92

8. Threonine 0.440 1.95

9. Arginine 0.251 2.15

10. Alanine 0.280 3.06

11. Tyrosine 0.128 1.65

12. Cystine 0.067 1.9

13. Valine 0.084 2.47

14. Methionine 0.073 1.82

15. Norvaline 0.073 1.72

16. Tryptophan 0.054 1.57

17. Phenylalanine 0.051 1.66

18. Isoleucine 0.047 1.72

19. Leucine 0.03 1.7

20. Lysine 0.028 1.66

21. Hydroxyproline 0.021 4.13

22. Sarcosine 0.026 1.15

23. Proline 0.021 4.36

• Retention time %RSD mostly under 1%• Peak area %RSD mostly under 3%

For Research Use Only. Not for use in diagnostic procedures

Page 16: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

System suitability as per European Pharmacopoeia (Ph.Eur)

The European Pharmacacopoeia (Ph. Eur.) defines requirements for the qualitative and quantitative composition of amino acids and mixtures of amino acids. The requirements for allowed impurities are also defined. Manufacturers of amino acids are legally bound to prove that their amino acids meet these specifications before they can distribute their products in Europe.

Leucine (Leu) is a branched-chain α-amino acid and is produced by the fermentation process. During this process, isoleucine can be produced as a by-product. The European Pharmacopoeia states that leucine and isoleucine should have a resolution of not less than 1.5

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LeucineIsoleucine

≥ 1.5

Ref: Ph.Eur.9.0 (2.2.56) Amino Acid Analysis

Page 17: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Ample Resolution of Leucine & Isoleucine

Baseline resolution of isoleucine and leucine (Rs = 4.35) meeting the regulatory requirements for these components.

min2 4 6 8 10 12

mAU

0

100

200

300

400

500DAD1 A, Sig=338,10 Ref=390,20,

Asp

art

ic a

cid

Glu

tam

ic a

cid

Se

rine

Try

osi

ne

His

tidin

e Gly

cin

eT

hre

on

ine

Ala

nin

e

Cys

tein

e

Va

line

Me

thio

nin

e

Ph

en

yla

lan

ine

Iso

leu

cin

e

Leu

cin

eL

ysin

e

. P

rolin

e

Rs = 4.35

Arg

inin

e

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Column Leu/Ile Rs

( ≥ 1.5)

Agilent AdvanceBio AAA

4.6 × 100 mm4.5

Agilent AdvanceBio AAA

3 × 100 mm4.6

Protein hydrolysate sample

For Research Use Only. Not for use in diagnostic procedures

Page 18: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Linearity and Limits of Detection & Quantitation

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min4 6 8

mAU

0

20

40

60

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100

Asp

ara

gin

e

Glu

tam

ine

Try

pto

phan

min2.4 2.6 2.8

mAU

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20

40

60

80

100

min3.2 3.4 3.6

mAU

0

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30

40

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min8.2 8.4 8.6

mAU

0

10

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40

50

60

70

Asparagine Glutamine Tryptophan

For Research Use Only. Not for use in diagnostic procedures

Page 19: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

y = 2.0654x + 2.6479

R² = 0.9993

0

500

1000

1500

2000

2500

0 200 400 600 800 1000 1200

Are

a

Concentration (pmol)

Linearity for Aspargine

y = 1.0107x + 0.3716

R² = 0.9997

0

200

400

600

800

1000

1200

0 200 400 600 800 1000 1200

Are

a

Concentration (pmol)

Linearity for Glutamine

y = 1.6446x + 6.0767

R² = 0.9999

0

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1400

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0 200 400 600 800 1000 1200

Are

a

Concentration (pmol)

Linearity for Tryptophan

Linearity and Limits of Detection & Quantitation

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Concentration (pmol) S/N ratio

Asparagine

0.9 (LOD) 5.3

1.9 (LOQ) 10.8

Glutamine

0.9 (LOD) 3.0

3.8 (LOQ) 13.8

Tryptophan

0.9 (LOD) 4.5

3.8 (LOQ) 20.5

S/N >3.0 = LODS/N > 10 = LOQ

For Research Use Only. Not for use in diagnostic procedures

Page 20: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

min2 3 4 5 6 7 8 9

mAU

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50

0

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Glu

tam

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cid

Asp

ara

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cin

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reo

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Arg

inin

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Ty

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Ala

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Cy

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Me

thio

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rva

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Ph

en

yla

lan

ine

Iso

leu

cin

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Leu

cin

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Lysi

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Glu

tam

ic a

cid

Glu

tam

ine

His

tid

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Th

reo

nin

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Arg

inin

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Ty

rosi

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Ala

nin

e Cy

stin

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Va

lin

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Me

thio

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Ph

en

yla

lan

ine

Iso

leu

cin

e

Leu

cin

e

Lysi

ne

MEM Eagle , Sig=338,10 Ref=390,20,

250pmol AA std , Sig=338,10 Ref=390,20,

AAA of Cell Culture Media – MEM

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L-Arginine, L-Cystine, L-Glutamine, L-Histidine, L-Isoleucine, L- Leucine, L-Lysine, L-Methionine, L- Phenylalanine, L-Threonine, L-Tryptophan, L- Tyrosine and L-Valine, L-Glutamic acid

For Research Use Only. Not for use in diagnostic procedures

Page 21: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

AAA of Cell Culture Media – NEAA cell culture supplement

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L-Alanine, L-Asparagine, L-Aspartic acid, L-Glutamic acid, Glycine, L-Proline and L-Serine

min2 4 6 8 10 12

mAU

80

60

40

20

0

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Glu

tam

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cid

Asp

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His

tid

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Gly

cin

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Th

reo

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Arg

inin

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Ty

rosi

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Ala

nin

e

Cy

stin

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Va

lin

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Me

thio

nin

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No

rva

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Ph

en

yla

lan

ine

Iso

leu

cin

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Leu

cin

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Lysi

ne

Hy

dro

xy

pro

lin

e

Sa

rco

sin

e

Pro

lin

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Asp

art

ic a

cid

A

spa

rtic

aci

d

Ala

nin

eAsp

ara

gin

e

Glu

tam

ic a

cid

Gly

cin

e

Pro

lin

eSe

rin

e

NEAA cell culture supplement , Sig=338,10 Ref=390,20,

250pmol AA std , Sig=338,10 Ref=390,20,

For Research Use Only. Not for use in diagnostic procedures

Page 22: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

AAA of Cell Culture Media – RPMI 1640

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L-Arginine, L-Glutamic acid, L-Asparagine, L-Cystine, Glycine, L-Histidine, Hydroxy-L-Proline, L-Isoleucine, L-Leucine,L-Lysine, L-Methionine, L-Phenylalanine, L-Proline, L-Serine, L-Threonine, L-Tryptophan, L-Tyrosine and L-Valine

min2 4 6 8 10 12

mAU

150

100

50

0

50

100

150

200G

luta

mic

aci

d

Asp

ara

gin

e

Se

rin

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Glu

tam

ine

His

tid

ine

Gly

cin

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Th

reo

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Arg

inin

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Ty

rosi

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Ala

nin

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Cy

stin

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Va

lin

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Me

thio

nin

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No

rva

lin

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Try

pto

ph

an

Ph

en

yla

lan

ine

Iso

leu

cin

e

Leu

cin

e

Lysi

ne

Hy

dro

xy

pro

lin

e

Sa

rco

sin

e

Pro

lin

e

Asp

art

ic a

cid

Pro

lin

e

Arg

inin

eAsp

ara

gin

e

Cy

stin

e

Gly

cin

e

His

tid

ine

Hy

dro

xy

pro

lin

e

Iso

leu

cin

e

Leu

cin

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Lysi

ne

Me

thio

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Ph

en

yla

lan

ineS

eri

ne

Th

reo

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e

Try

pto

ph

an

Ty

rosi

ne

Va

lin

eGlu

tam

ic a

cid

Asp

art

ic a

cid

RPMI 1640 Media , Sig=338,10 Ref=390,20,

250pmol AA std , Sig=338,10 Ref=390,20,

For Research Use Only. Not for use in diagnostic procedures

Page 23: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Lifetime of SPP columns in phosphate buffer, pH 8, at elevated temperature. Mobile phase: Premixed 60% 30 mM sodium phosphate buffer at pH 8 and 40% acetonitrile; Flow rate 0.4

mL/min; UV absorbance 254 nm; 65 °C; Columns: 2.1 x 50 mm, 2.7 µm; Analyte: Naphthalene.

50

60

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110

0 1000 2000 3000

% I

nit

ial

Eff

icie

ncy

mL Stress Buffer

Non-HPH silica column

Poroshell HPH-C18

Poroshell HPH C18 last longer in phosphate buffer

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For Research Use Only. Not for use in diagnostic procedures

Page 24: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Traditional Lifetime TestingUsing conventional column testing Eclipse Plus C18 column test looks great and will perform well for most customers. However it is not a realistic test for most lab workflow.

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Page 25: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Improvements in Lifetime Testing for AA Analysis

Past lifetime testing consisted of 500 injections without stopping• This test, while it could differentiate long life columns, was not indicative of a customer workflow

Customers will typically run ~20 to 50 or 100 samples, then stop, and resume a day or more later• This is much more stressful on the column, and will cause columns to fail sooner versus running 500

injections straight through.

The lifetime testing for the Poroshell HPH-C18 was adapted to more customer focused workflow, with breaks between series of injections to give a true indicator of the lifetime ni the customers’ hands

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Page 26: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Test like a customer runs: 100 injections (3 days), Store (4 days)

min0 2 4 6 8 10 12

mAU

020406080

DAD1 A, Sig=338,10 Ref=390,20, TT (AALIFETIME\AALIFE 2014-09-05 10-21-37LFS-RDWS022\WJL00010000025.D)

1.0

76

1.6

37

3.4

42

4.1

07

4.3

66

4.5

32

4.7

93

5.1

23

5.4

86

6.4

52

7.5

02

7.6

03 7.8

84

8.0

51

9.0

08

9.1

66

9.6

71

10

.10

4

11

.15

3

min0 2 4 6 8 10 12

mAU

020406080

DAD1 A, Sig=338,10 Ref=390,20, TT (AALIFETIME\AALIFE 2014-09-15 16-13-54LFS-RDWS022\WJL00010000225.D)

1.0

81

1.6

56

3.4

21

4.0

91

4.3

42

4.5

03

4.7

63

5.1

05

5.4

48

6.4

17

7.4

72

7.5

68

7.8

42

8.0

11

8.9

65

9.1

16

9.6

22

10

.07

0

11

.12

0

min0 2 4 6 8 10 12

mAU

020406080

DAD1 A, Sig=338,10 Ref=390,20, TT (AALIFETIME\AALIFE 2014-09-18 14-02-17LFS-RDWS022\WJL00010000400.D)

1.0

61

1.5

89

3.4

03

4.0

73

4.3

19

4.4

81

4.7

42

5.0

79

5.4

15

6.3

88

7.4

41

7.5

39 7.8

07

7.9

76

8.9

32

9.0

84

9.5

86

10

.04

1

11

.08

3

min0 2 4 6 8 10 12

mAU

020406080

DAD1 A, Sig=338,10 Ref=390,20, TT (AALIFETIME\AALIFE 2014-09-25 12-56-57LFS-RDWS022\WJL00010000500.D)

1.0

70

1.5

46

3.3

81

4.0

49

4.2

90

4.4

51

4.7

15

5.0

60

5.3

85

6.3

64

7.4

20 7

.50

9

7.7

71

7.9

42

8.8

87

9.0

39

9.5

33

9.9

71

11

.02

3

Injection 25

Injection 225

Injection 400

Injection 500

Stops @300 and 400

Stop @100 and 200

Stop @ 525

Most labs run a batch of samples (25-100) and then shut off for a few days so we did too

Looks great after 500 injections run 100 injections shut down 4 days repeat

26

For Research Use Only. Not for use in diagnostic procedures

Page 27: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Amino Acid Analysis in Fermentation Applications

min1 2 3 4 5 6 7

mAU

0

25

50

75

100

125

150

175

DAD1 A, Sig=338,10 Ref=390,20, TT (WJL_HPH_AA\WJL_AA2 2015-03-29 13-52-07\AA_HPH0000008.D)0.4

84 0.7

05

1.1

23

1.2

75

1.8

93

2.2

25

2.5

79

2.7

75

2.8

63

2.9

20

2.9

93

3.1

92

3.4

00

4.0

62

4.7

92

4.9

78

5.2

24

5.5

38

5.6

62

5.7

59

5.8

46

6.0

65

6.6

65

min1 2 3 4 5 6 7

mAU

0

10

20

30

DAD1 B, Sig=262,16 Ref=324,8, TT (WJL_HPH_AA\WJL_AA2 2015-03-29 13-52-07\AA_HPH0000008.D)

0.3

68

0.4

33

0.4

86

0.5

31

0.5

47

0.5

61

0.5

98

0.6

73

0.6

93

1.1

23

1.1

86

Soy Sauce diluted 1/100

Many other foods (such as soy sauce) and pharmaceuticals that are produced using fermentation processes are monitored by AAA

27

Page 28: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Amino Acids Analysis for Batch Comparison

Old Dominion Cherry Blossom Lager

Kronenburg Blanc

Blue Moon Belgian Style Wheat

min0 1 2 3 4 5 6 7

mAU

-50

0

50

100

150

200

DAD1 A, Sig=338,10 Ref=390,20, TT (WJL_HPH_AA\WJL_AA2 2015-03-29 13-52-07\AA_HPH0000002.D)0.6

88

1.1

04

2.1

70

2.2

28

2.5

77

2.7

68

3.1

85

3.3

99

3.5

16

4.0

51

4.7

93

4.8

74

5.1

98

5.3

35

5.4

74

5.6

56

5.7

44

5.8

47

min0 1 2 3 4 5 6 7

mAU

-50

0

50

100

150

200

DAD1 A, Sig=338,10 Ref=390,20, TT (WJL_HPH_AA\WJL_AA2 2015-03-29 13-52-07\AA_HPH0000004.D)

0.6

92

1.1

26

2.0

84

2.2

37

2.5

82 2.7

75

2.9

07 3.1

92

3.3

86

3.5

24

4.0

54

4.7

91

4.8

84

5.2

18

5.5

48

5.6

60

5.7

43

5.8

60

min0 1 2 3 4 5 6 7

mAU

-50

0

50

100

150

200

DAD1 A, Sig=338,10 Ref=390,20, TT (WJL_HPH_AA\WJL_AA2 2015-03-29 13-52-07\AA_HPH0000006.D)

0.6

94

1.1

24

2.0

85

2.2

33

2.5

78 2

.766

3.1

87 3.3

79

3.5

15

4.0

47

4.7

82

4.8

81

4.9

78

5.2

18 5

.535

5.6

48

5.7

47 5

.846

6.0

71

Quantity and diversity of amino acids is evident, can be used to monitor reactions and compare batches

28

Page 29: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Tips & Tricks - Maintenance

• Replace derivatization reagent, borate buffer, amino acid standard daily

• Recalibrate for retention times and response factors daily

• Check column and guard column performance by following specs (Rs for 2 pairs of AA)

• Replace mobile phase A and B with fresh ones every other day

• Exchange guard column if high back pressure develops

• Avoid using MAX mixing speed during sample derivatization• The max speed on newer LCs is much faster than older LCs (1100s, 1200s), and can cause

excessive wear on the autosampler.

29

Page 30: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Poor chromatographic resolution?

• Cell culture media does not require any sample preparation, however appropriate dilutions have to be made to suit detector response

• In all cases, use the low-volume heat exchanger with short red tubing to minimize extra column volume

• Ensure proper connections

• Damaged guard or analytical column

Low intensity chromatogram?

• OPA/FMOC reagent deteriorated

• Air bubble in vial insert

Column storage?

• Never leave the column in mobile phase A even if it’s just overnight

• For short term always store the column in mobile phase B

• For long term, store column in 50/50 acetonitrile/H2O

30

Tips & Tricks - Troubleshooting

Page 31: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Damaged Column

31

min2 4 6 8 10 12 14

mAU

0

50

100

150

200

250

300

350

DAD1 A, Sig=338,10 Ref=390,20, TT (AAA FINAL\AAA 46 X 100 COLUMN DAMAGE 2 (2)\1DF-0101.D)

After three days in mobile phase A

Page 32: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Tips & Tricks – Saving Time

• After Injection 1, during the sample derivatization for Injection 2, the initial mobile phase condition is flowing through the LC and the column

• Save time by shortening the length of the re-equilibration time at the end of the method by the amount of time consumed by sample derivatization

32

Re-equilibration

Separation

High Organic Wash

Sample Derivatization

Time (min) %B

0 2

0.35 2

13.4 57

13.5 100

15.7 100

15.8 2

18 stop

23 minutes

Initial mobile phase conditions are

running through the column!

Page 33: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Tips & Tricks – Saving Time

33

23 + 23 = 46 minutes for 2 samples

• After Injection 1, during the sample derivatization for Injection 2, the initial mobile phase condition is flowing through the LC and the column

• Save time by shortening the length of the re-equilibration time at the end of the method by the amount of time consumed by sample derivatization

Time (min) %B

0 2

0.35 2

13.4 57

13.5 100

15.7 100

15.8 2

18 stop

For Research Use Only. Not for use in diagnostic procedures

Page 34: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

Tips & Tricks – Saving Time

34

20.8 + 20.8 = 41.6 minutes for 2 samples

• After Injection 1, during the sample derivatization for Injection 2, the initial mobile phase condition is flowing through the LC and the column

• Save time by shortening the length of the re-equilibration time at the end of the method by the amount of time consumed by sample derivatization

Time (min) %B

0 2

0.35 2

13.4 57

13.5 100

15.7 100

15.8 2

18 stop

For Research Use Only. Not for use in diagnostic procedures

Page 35: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

How-To Guide – Step by Step Instructions & Method Details

All the information you need

Document number 5991-7694EN

35

For Research Use Only. Not for use in diagnostic procedures

Page 36: Determination of Amino Acid Composition using … · Pre-Column Derivitization and Superficially Porous Columns 1. ... (DTDPA) 5061-3330 AA, standard 1nmol 10/PK 5061-3331 AA standards,

For Research Use Only. Not for use in diagnostic procedures

Summary

• We used the Agilent AdvanceBio AAA solution for the automated online derivatization and separation of amino acids.

• Area and RT precision of the method were excellent, and Leu/Ile resolution met the system suitability requirement.

• Linearity curves with ten standard concentrations of three amino acids, ranging from 0.9pmol to 1nmol, had excellent coefficient of linearity values, indicating that the method was quantitative and accurate.

• The LOD and LOQ for the amino acids were 0.9pmol and 3.8 pmol respectively, indicating that the method was sensitive.

• This method was able to separate and detect, amino acids from a variety of samples, including cell culture media, protein hydrolysate, and fermentation reactions.

36