Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 ›...

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Detecting the known- latest technologies in pen-side tests …a reliable test even when it is raining and dark? Kath Webster & Andrew Soldan

Transcript of Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 ›...

Page 1: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Detecting the known- latest technologies in pen-side tests…a reliable test even when it is raining and dark?

Kath Webster & Andrew Soldan

Page 2: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation
Page 3: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation
Page 4: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Constraints- Resource poor?• Not much money

– Low input systems eg sheep in Australia or poultry in Malawi• No/poor facilities

– Heat, light, power, shelter• Little expertise

– Laboratory tech, service engineers, result interpretation skills• Poor supply/communication lines

– Cold chain + storage, no transport, result communication • Inability to take sample

– Blood, faeces, • Very little time

– Other work to do – stopping to run a test does not fit into work flow

Page 5: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Other drivers to move test from the lab

• No existing test• Human safety• Better customer service• Lower overall cost• Need for rapid results• Sample deterioration

Page 6: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Personal case studies

Page 7: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Sheep with mouth lesions during FMD outbreak in UK 2001

• Flock of 30 – not quite pets but close!

• Lesions in mouth of three• Two miles from infected

farm but not contiguous• FMD could not be ruled out• Slaughtered• Compensation ~US$2,000

Page 8: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Dog with starey eyes in Chitipa Northern Malawi

• One person bitten• Whole village concerned• Post exposure treatment second

biggest drug cost to Malawi health system after malaria treatment

• No holding facilities• 8 hrs drive to central lab

Page 9: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Horse with nasal discharge in Devon, UK

• DIY livery yard with ~30 horses

• New horse with runny nose• Differential – Strangles (S

equi equi)• Other owners saying horse

should be moved out of yard• Swab taken, horse isolated

and result in 48hrs

Page 10: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

What is an ideal test for such situations

• Cheap- <$1 to $20 for test. No equipment or very cheap equipment - <$500?

• Robust in range of situations, ideally does not need external power source

• Easy to use - 10 min familiarisation with the instructions, result interpretation easy

• Little/no sample prep, droppers not pipettes• Temperature stable in storage• Rapid result - <30 min• Accurate enough to inform a decision

Page 11: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Yes• Rose Bengal Plate test• Latex agglutination tests• Lateral flow devices• SNAP tests• Urine dip sticks• Glucometer

Do such tests exist?

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Pregnancy test

• Gold standard for point of care testing• Untrained user• Rapid – 1 to 3 minutes• >99% accurate 2w after conception• Informative• Cheap ~ $4 each

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Page 13: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Some interesting technologies

• More of what we have already – LFD, SNAP etc• Miniaturised/simplified PCR based• Array based• Isothermal amplification based• Paper based• Biological sensor based• Sequencing

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Miniaturised/simplified PCR based

Page 15: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Miniaturised/simplified PCR based

Page 16: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Array based

Page 17: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Isothermal amplification based

Page 18: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Isothermal amplification based

Page 19: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation
Page 20: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Isothermal amplification based

Page 21: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Paper based

Page 22: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Biological sensor based

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Sequencing

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Technology is great but ………

• Is it cheap enough? – both instrument and test cost

• Does the operator have the right skills?– To select test– To do test– To take sample– To interpret result

• Is it robust enough?• Is it accurate enough?

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Where will the test be done?

• Pen side• In the kitchen/farm office• At a forward operating base in an outbreak• In a laboratory

– Regional lab– Local lab– Central lab

Page 26: Detecting the known- latest technologies in pen-side tests › eng › BIOTHREAT2015 › Presentations › 1_Kath_… · – Laboratory tech, service engineers, result interpretation

Conclusions

• Confusion between the need for rapid results and the need for on farm testing – technical solutions may be different

• Technology is advancing rapidly• New tests will appear • Molecular – no/little equipment costs• These tests will require little training to use• There will be a move from central labs to local labs –

Abattoir, LDCCs, practice labs, private labs etc• Advantages for the developing worldThe major move is going to be from central lab to local lab – not onto farm

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