EBI is an Outstation of the European Molecular Biology Laboratory.

DAS implementations

Bernat Gel

01/03/11

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How do I DAS?

DAS enabled applications

DAS libraries

Clients Servers

ClientsServersJava, Perl Java, Perl, Javascript

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Ensembl

http://www.ensembl.org/

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Pfam

http://pfam.sanger.ac.uk/

Spice

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http://www.dasregistry.org/spice/

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Dasty

http://www.ebi.ac.uk/dasty/

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Dalliance

http://www.biodalliance.org/

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GBrowse

http://gmod.org/wiki/Gbrowse

And many more

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Jalview

IGB

The new EBI search

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Data Sources?

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DAS Servers

More than 750 DAS servers fom more than 50 organizations

Ensembl Uniprot

UCSC Many small groups

Most of them available at the DAS Registry

http://www.dasregistry.org

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BioMart

BioMarts are also DAS servers

http://www.biomart.org/

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What about MY data?

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easyDAS

http://www.ebi.ac.uk/panda-srv/easydas

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Libraries

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Clients

Bio::DAS::Lite

DASobert

JDAS

http://search.cpan.org/~rpettett/Bio-Das-Lite/

http://www.spice-3d.org/dasobert/index.jsp

http://code.google.com/p/jdas/

ttp://code.google.com/p/jsdas/jsDAS

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Servers

ProServer

MyDAS

Dazzle

http://sourceforge.net/projects/proserver/

http://code.google.com/p/mydas/

http://www.biojava.org/wiki/Dazzle

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Questions?