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College of Biological Sciences...Abd El-Rahim WM, Moawad H, Abdel Azeiz AZ, Sadowsky MJ....
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CBS 2017 Publications Page 1 of 41
CollegeofBiologicalSciences2017PublicationsbyAuthorsinCBS
Abd El-Rahim WM, Moawad H, Abdel Azeiz AZ, Sadowsky MJ. Optimization of conditions for decolorization of azo-based textile dyes by multiple fungal species. Journal of Biotechnology. 2017 Oct 20;260:11-17. Available from, DOI: 10.1016/j.jbiotec.2017.08.022
Abdelrahman H, ElHady M, Alcivar-Warren A, Allen S, Al-Tobasei R, Bao L et al. Erratum to: Aquaculture genomics, genetics and breeding in the United States: Current status, challenges, and priorities for future research. [BMC Genomics. 18, (2017), (191)] DOI: 10.1186/s12864-017-3557-1. BMC Genomics. 2017 Mar 16;18(1). 235. Available from, DOI: 10.1186/s12864-017-3614-9
Abdelrahman H, ElHady M, Alcivar-Warren A, Allen S, Al-Tobasei R, Bao L et al. Aquaculture genomics, genetics and breeding in the United States: Current status, challenges, and priorities for future research. BMC Genomics. 2017 Feb 20;18(1). 191. Available from, DOI: 10.1186/s12864-017-3557-1
Abou-Shanab RAI, Wongphatcharachai M, Sheaffer CC, Orf JC, Sadowsky MJ. Competition between introduced Bradyrhizobium japonicum strains and indigenous bradyrhizobia in Minnesota organic farming systems. Symbiosis. 2017 Nov 1;73(3):155-163. Available from, DOI: 10.1007/s13199-017-0505-4
Abudayyeh OO, Gootenberg JS, Essletzbichler P, Han S, Joung J, Belanto JJ et al. RNA targeting with CRISPR-Cas13. Nature. 2017 Oct 12;550(7675):280-284. Available from, DOI: 10.1038/nature24049
Ackerman D, Griffin D, Hobbie SE, Finlay JC. Arctic shrub growth trajectories differ across soil moisture levels. Global Change Biology. 2017 Oct 1;23(10):4294-4302. Available from, DOI: 10.1111/gcb.13677
Adamala KP, Martin-Alarcon DA, Guthrie-Honea KR, Boyden ES. Engineering genetic circuit interactions within and between synthetic minimal cells. Nature chemistry. 2017 May 1;9(5):431-439. Available from, DOI: 10.1038/nchem.2644
Adams RH, Schield DR, Card DC, Blackmon H, Castoe TA. GppFst: Genomic posterior predictive simulations of FST and dxy for identifying outlier loci from population genomic data. Bioinformatics. 2017 May 1;33(9):1414-1415. Available from, DOI: 10.1093/bioinformatics/btw795
Ahmed W, Staley C, Sidhu J, Sadowsky M, Toze S. Amplicon-based profiling of bacteria in raw and secondary treated wastewater from treatment plants across Australia. Applied Microbiology and Biotechnology. 2017 Feb 1;101(3):1253-1266. Available from, DOI: 10.1007/s00253-016-7959-9
Ahmed W, Staley C, Hamilton KA, Beale DJ, Sadowsky MJ, Toze S et al. Amplicon-based taxonomic characterization of bacteria in urban and peri-urban roof-harvested rainwater stored in tanks. Science of the Total Environment. 2017 Jan 15;576:326-334. Available from, DOI: 10.1016/j.scitotenv.2016.10.090
Alejo JL, Blanchard SC. Miscoding-induced stalling of substrate translocation on the bacterial ribosome. Proceedings of the National Academy of Sciences of the United States of America. 2017 Oct 10;114(41):E8603-E8610. Available from, DOI: 10.1073/pnas.1707539114/-/DCSupplemental
Allen K, Dupuy JM, Gei MG, Hulshof C, Medvigy D, Pizano C et al. Will seasonally dry tropical forests be sensitive or resistant to future changes in rainfall regimes? Environmental Research Letters. 2017 Feb 3;12(2). 023001. Available from, DOI: 10.1088/1748-9326/aa5968
Anderson SN, Johnson CS, Chesnut J, Jones DS, Khanday I, Woodhouse M et al. The Zygotic Transition Is Initiated in Unicellular Plant Zygotes with Asymmetric Activation of Parental Genomes. Developmental Cell. 2017 Nov 6;43(3):349-358.e4. Available from, DOI: 10.1016/j.devcel.2017.10.005
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CBS 2017 Publications Page 2 of 41
Andrew AL, Perry BW, Card DC, Schield DR, Ruggiero RP, McGaugh SE et al. Growth and stress response mechanisms underlying post-feeding regenerative organ growth in the Burmese python. BMC Genomics. 2017 May 2;18(1). 338. Available from, DOI: 10.1186/s12864-017-3743-1
Argyris PP, Koutlas IG. Orthokeratinized Odontogenic Cyst with an Associated Keratocystic Odontogenic Tumor Component and Ghost Cell Keratinization and Calcifications in a Patient with Gardner Syndrome. Head and Neck Pathology. 2017 Jun 1;11(2):240-248. Available from, DOI: 10.1007/s12105-016-0748-z
Argyris PP, Gopalakrishnan R, Hu Y, Reichenberger EJ, Koutlas IG. Clinicopathologic and Molecular Characteristics of Familial Cherubism with Associated Odontogenic Tumorous Proliferations. Head and Neck Pathology. 2018 Mar 1;12(1):136-144. Available from, DOI: 10.1007/s12105-017-0837-7
Aronovich EL, Hyland KA, Hall BC, Bell JB, Olson ER, Rusten MU et al. Prolonged Expression of Secreted Enzymes in Dogs after Liver-Directed Delivery of Sleeping Beauty Transposons: Implications for Non-Viral Gene Therapy of Systemic Disease. Human gene therapy. 2017 Jul 1;28(7):551-564. Available from, DOI: 10.1089/hum.2017.004
Arroyo M, Kuriyama R, Trimborn M, Keifenheim D, Cañuelo A, Sánchez A et al. MCPH1, mutated in primary microcephaly, is required for efficient chromosome alignment during mitosis. Scientific Reports. 2017 Dec 1;7(1). 13019. Available from, DOI: 10.1038/s41598-017-12793-7
Arvola RM, Weidmann CA, Tanaka Hall TM, Goldstrohm AC. Combinatorial control of messenger RNAs by Pumilio, Nanos and Brain Tumor Proteins. RNA biology. 2017 Nov 2;14(11):1445-1456. Available from, DOI: 10.1080/15476286.2017.1306168
Asmus A, Koltz A, McLaren J, Shaver GR, Gough L. Long-term nutrient addition alters arthropod community composition but does not increase total biomass or abundance. Oikos. 2018 Mar 1;127(3):460-471. Available from, DOI: 10.1111/oik.04398
Assadian F, Kamel W, Laurell G, Svensson C, Punga T, Akusjärvi G. Expression profile of Epstein-Barr virus and human adenovirus small RNAs in tonsillar B and T lymphocytes. PLoS ONE. 2017 May 1;12(5). e0177275. Available from, DOI: 10.1371/journal.pone.0177275
Aukema KG, Escalante DE, Maltby MM, Bera AK, Aksan A, Wackett LP. In Silico Identification of Bioremediation Potential: Carbamazepine and Other Recalcitrant Personal Care Products. Environmental Science and Technology. 2017 Jan 17;51(2):880-888. Available from, DOI: 10.1021/acs.est.6b04345
Avery AW, Fealey ME, Wang F, Orlova A, Thompson AR, Thomas DD et al. Structural basis for high-affinity actin binding revealed by a β-III-spectrin SCA5 missense mutation. Nature communications. 2017 Dec 1;8(1). 1350. Available from, DOI: 10.1038/s41467-017-01367-w
Avery AW, Thomas DD, Hays TS. β-III-spectrin spinocerebellar ataxia type 5 mutation reveals a dominant cytoskeletal mechanism that underlies dendritic arborization. Proceedings of the National Academy of Sciences of the United States of America. 2017 Oct 31;114(44):E9376-E9385. Available from, DOI: 10.1073/pnas.1707108114
Bajaj R, Chen S, Hu W, Huang Y, Prasad R, Kumar V et al. Protocol for biocontrol of soybean cyst nematode with root endophytic fungi. In Modern Tools and Techniques to Understand Microbes. Springer International Publishing. 2017. p. 401-412. Available from, DOI: 10.1007/978-3-319-49197-4_25
Baldridge G, Higgins LA, Witthuhn B, Markowski T, Baldridge A, Armien A et al. Proteomic analysis of a mosquito host cell response to persistent Wolbachia infection. Research in Microbiology. 2017 Sep 1;168(7):609-625. Available from, DOI: 10.1016/j.resmic.2017.04.005
Baldwin BG, Thornhill AH, Freyman WA, Ackerly DD, Kling MM, Morueta-Holme N et al. Species richness and endemism in the native flora of California. American journal of botany. 2017 Jan 1;104(3):487-501. Available from, DOI: 10.3732/ajb.1600326
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CBS 2017 Publications Page 3 of 41
Balenger SL, Lara LM, Zuk M. Relative Amplitude of Courtship Song Chirp and Trill Components Does Not Alter Female Teleogryllus oceanicus Mating Behavior. Ethology. 2017 Feb 1;123(2):168-173. Available from, DOI: 10.1111/eth.12583
Ballen CJ, Blum JE, Brownell S, Hebert S, Hewlett J, Klein JR et al. A call to develop course-based undergraduate research experiences (CUREs) for Nonmajors courses. CBE Life Sciences Education. 2017 Jun 1;16(2). Available from, DOI: 10.1187/cbe.16-12-0352
Ballen CJ, Salehi S, Cotner S. Exams disadvantage women in introductory biology. PLoS ONE. 2017 Oct 1;12(10). e0186419. Available from, DOI: 10.1371/journal.pone.0186419
Ballen CJ, Wieman C, Salehi S, Searle JB, Zamudio KR. Enhancing diversity in undergraduate science: self-efficacy drives performance gains with active learning. CBE Life Sciences Education. 2017 Dec 1;16(4). ar56. Available from, DOI: 10.1187/cbe.16-12-0344
Ballen CJ, Greene HW. Walking and talking the tree of life: Why and how to teach about biodiversity. PLoS biology. 2017 Mar 20;15(3). e2001630. Available from, DOI: 10.1371/journal.pbio.2001630
Ballen CJ, Mason NA. Longitudinal analysis of a diversity support program in biology: A national call for further assessment. BioScience. 2017 Jan 1;67(4):367-373. Available from, DOI: 10.1093/biosci/biw187
Ballhorn DJ, Elias JD, Balkan MA, Fordyce RF, Kennedy PG. Colonization by nitrogen-fixing Frankia bacteria causes short-term increases in herbivore susceptibility in red alder (Alnus rubra) seedlings. Oecologia. 2017 Jun 1;184(2):497-506. Available from, DOI: 10.1007/s00442-017-3888-2
Barker FK. Molecular Phylogenetics of the Wrens and Allies (Passeriformes: Certhioidea), with Comments on the Relationships of Ferminia. American Museum Novitates. 2017 Dec 8;2017-December(3887):1-27. Available from, DOI: 10.1206/3887.1
Barreto Pereira E, Pinto Ledezma JN, Gomes de Freitas C, Villalobos F, Garcia Collevatti R, Medeiros Maciel N. Evolution of anuran foam nest: trait conservatism and lineage diversification. Biological Journal of the Linnean Society. 2017 Oct 25. Available from, DOI: https://doi.org/10.1093/biolinnean/blx110
Barreto Pereira E, Pinto Ledezma JN, Gomes de Freitas C, Villalobos F, Garcia Collevatti R, Medeiros Maciel N. Evolution of the anuran foam nest: trait conservatism and lineage diversification. Biological Journal of the Linnean Society. 2017 Nov 23;122(4):814.
Barrio IC, Lindén E, Te Beest M, Olofsson J, Rocha A, Soininen EM et al. Background invertebrate herbivory on dwarf birch (Betula glandulosa-nana complex) increases with temperature and precipitation across the tundra biome. Polar Biology. 2017 Nov 1;40(11):2265-2278. Available from, DOI: 10.1007/s00300-017-2139-7
Bauer H, Henschel P, Packer C, Sillero-Zubiri C, Chardonnet B, Sogbohossou EA et al. Lion trophy hunting in West Africa: A response to Bouché et al. PLoS ONE. 2017 Mar 1;12(3). e0173691. Available from, DOI: 10.1371/journal.pone.0173691
Beale DJ, Karpe AV, Ahmed W, Cook S, Morrison PD, Staley C et al. A community multi-omics approach towards the assessment of surface water quality in an urban river system. International journal of environmental research and public health. 2017 Mar 14;14(3). 303. Available from, DOI: 10.3390/ijerph14030303
Beale DJ, Crosswell J, Karpe AV, Ahmed W, Williams M, Morrison PD et al. A multi-omics based ecological analysis of coastal marine sediments from Gladstone, in Australia's Central Queensland, and Heron Island, a nearby fringing platform reef. Science of the Total Environment. 2017 Dec 31;609:842-853. Available from, DOI: 10.1016/j.scitotenv.2017.07.184
Becraft ED, Dodsworth JA, Murugapiran SK, Thomas SC, Ohlsson JI, Stepanauskas R et al. Genomic comparison of two family-level groups of the uncultivated NAG1 archaeal lineage from chemically and geographically disparate hot springs. Frontiers in Microbiology. 2017 Oct 31;8(OCT). 2082. Available from, DOI: 10.3389/fmicb.2017.02082
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CBS 2017 Publications Page 4 of 41
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q et al. Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 2017 Apr 27;4. 170044. Available from, DOI: 10.1038/sdata.2017.44
Beier GL, Held BW, Giblin CP, Cavender-Bares J, Blanchette RA. American elm cultivars: Variation in compartmentalization of infection by Ophiostoma novo-ulmi and its effects on hydraulic conductivity. Forest Pathology. 2017 Dec 1;47(6). e12369. Available from, DOI: 10.1111/efp.12369
Bera AK, Aukema KG, Elias M, Wackett LP. Structure of the Cyanuric Acid Hydrolase TrzD Reveals Product Exit Channel. Scientific Reports. 2017 Mar 27;7. 45277. Available from, DOI: 10.1038/srep45277
Bergonzi C, Schwab M, Chabriere E, Elias M. The quorum-quenching lactonase from Alicyclobacter acidoterrestris: Purification, kinetic characterization, crystallization and crystallographic analysis. Acta Crystallographica Section:F Structural Biology Communications. 2017 Aug 1;73(8):476-480. Available from, DOI: 10.1107/S2053230X17010640
Bertram JH, Mulliner KM, Shi K, Plunkett MH, Nixon P, Serratore NA et al. Five fatty aldehyde dehydrogenase enzymes from Marinobacter and Acinetobacter spp. and structural insights into the aldehyde binding pocket. Applied and environmental microbiology. 2017 Jun 1;83(12). e00018-17. Available from, DOI: 10.1128/AEM.00018-17
Bhatia SP, Smanski MJ, Voigt CA, Densmore DM. Genetic Design via Combinatorial Constraint Specification. ACS synthetic biology. 2017 Nov 17;6(11):2130-2135. Available from, DOI: 10.1021/acssynbio.7b00154
Biederman L, Mortensen B, Fay P, Hagenah N, Knops J, La Pierre K et al. Nutrient addition shifts plant community composition towards earlier flowering species in some prairie ecoregions in the U.S. Central Plains. PLoS ONE. 2017 May 1;12(5). e0178440. Available from, DOI: 10.1371/journal.pone.0178440
Biel RG, Hacker SD, Ruggiero P, Cohn N, Seabloom EW. Coastal protection and conservation on sandy beaches and dunes: Context-dependent tradeoffs in ecosystem service supply. Ecosphere. 2017 Apr 1;8(4). e01791. Available from, DOI: 10.1002/ecs2.1791
Binning SA, Shaw AK, Roche DG. Parasites and host performance: Incorporating infection into our understanding of animal movement. Integrative and comparative biology. 2017 Aug 1;57(2):267-280. Available from, DOI: 10.1093/icb/icx024
Blackmon H, Ross L, Bachtrog D. Sex determination, sex chromosomes, and karyotype evolution in insects. Journal of Heredity. 2017 Jan 1;108(1):78-93. Available from, DOI: 10.1093/jhered/esw047
Blackmon H, Brandvain Y. Long-term fragility of Y chromosomes is dominated by short-term resolution of sexual antagonism. Genetics. 2017 Dec 1;207(4):1621-1629. Available from, DOI: 10.1534/genetics.117.300382
Borer ET, Grace JB, Harpole WS, MacDougall AS, Seabloom EW. A decade of insights into grassland ecosystem responses to global environmental change. Nature Ecology and Evolution. 2017 Apr 20;1(5). 0118. Available from, DOI: 10.1038/s41559-017-0118
Bowden SD, Palani NP, Libourel IGL. Stringent control of FLP recombinase in Escherichia coli. Journal of Microbiological Methods. 2017 Feb 1;133:52-54. Available from, DOI: 10.1016/j.mimet.2016.12.018
Bowman JL, Kohchi T, Yamato KT, Jenkins J, Shu S, Ishizaki K et al. Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome. Cell. 2017 Oct 5;171(2):287-304.e15. Available from, DOI: 10.1016/j.cell.2017.09.030
Boyd ES, Yu RQ, Barkay T, Hamilton TL, Baxter BK, Naftz DL et al. Effect of salinity on mercury methylating benthic microbes and their activities in Great Salt Lake, Utah. Science of the Total Environment. 2017 Mar 1;581-582:495-506. Available from, DOI: 10.1016/j.scitotenv.2016.12.157
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CBS 2017 Publications Page 5 of 41
Bratt AR, Finlay JC, Hobbie SE, Janke BD, Worm AC, Kemmitt KL. Contribution of Leaf Litter to Nutrient Export during Winter Months in an Urban Residential Watershed. Environmental Science and Technology. 2017 Mar 21;51(6):3138-3147. Available from, DOI: 10.1021/acs.est.6b06299
Breuillin-Sessoms F, Venterea RT, Sadowsky MJ, Coulter JA, Clough TJ, Wang P. Nitrification gene ratio and free ammonia explain nitrite and nitrous oxide production in urea-amended soils. Soil Biology and Biochemistry. 2017 Aug 1;111:143-153. Available from, DOI: 10.1016/j.soilbio.2017.04.007
Brinkac L, Voorhies A, Gomez A, Nelson KE. The Threat of Antimicrobial Resistance on the Human Microbiome. Microbial ecology. 2017 Nov 1;74(4):1001-1008. Available from, DOI: 10.1007/s00248-017-0985-z
Brion C, Legrand S, Peter J, Caradec C, Pflieger D, Hou J et al. Variation of the meiotic recombination landscape and properties over a broad evolutionary distance in yeasts. PLoS genetics. 2017 Aug 1;13(8). e1006917. Available from, DOI: 10.1371/journal.pgen.1006917
Briscoe Runquist RD, Geber MA, Pickett-Leonard M, Moeller DA. Mating system evolution under strong pollen limitation: Evidence of disruptive selection through male and female fitness in Clarkia xantiana. American Naturalist. 2017 Jan 1;189(5):549-563. Available from, DOI: 10.1086/691192
Brown CM, Staley C, Wang P, Dalzell B, Chun CL, Sadowsky MJ. A High-Throughput DNA-Sequencing Approach for Determining Sources of Fecal Bacteria in a Lake Superior Estuary. Environmental Science and Technology. 2017 Aug 1;51(15):8263-8271. Available from, DOI: 10.1021/acs.est.7b01353
Buell CR, Voytas D. Technology turbocharges functional genomics. Plant Cell. 2017 Jun 1;29(6):1179-1180. Available from, DOI: 10.1105/tpc.17.00443
Burch TR, Sadowsky MJ, LaPara TM. Effect of Different Treatment Technologies on the Fate of Antibiotic Resistance Genes and Class 1 Integrons when Residual Municipal Wastewater Solids are Applied to Soil. Environmental Science and Technology. 2017 Dec 19;51(24):14225-14232. Available from, DOI: 10.1021/acs.est.7b04760
Burgess MG, Fredston-Hermann A, Pinsky ML, Gaines SD, Tilman D. Reply to Le Pape et al.: Management is key to preventing marine extinctions. Proceedings of the National Academy of Sciences of the United States of America. 2017 Aug 1;114(31):E6275-E6276. Available from, DOI: 10.1073/pnas.1708147114
Burgess MG, Costello C, Fredston-Hermann A, Pinsky ML, Gaines SD, Tilman D et al. Range contraction enables harvesting to extinction. Proceedings of the National Academy of Sciences of the United States of America. 2017 Apr 11;114(15):3945-3950. Available from, DOI: 10.1073/pnas.1607551114
Burghardt LT, Guhlin J, Chun CL, Liu J, Sadowsky MJ, Stupar RM et al. Transcriptomic basis of genome by genome variation in a legume-rhizobia mutualism. Molecular ecology. 2017 Nov 1;26(21):6122-6135. Available from, DOI: 10.1111/mec.14285
Burlakoti RR, Gyawali S, Chao S, Smith KP, Horsley RD, Cooper B et al. Genome-wide association study of spot form of net blotch resistance in the upper midwest barley breeding programs. Phytopathology. 2017 Jan 1;107(1):100-108. Available from, DOI: 10.1094/PHYTO-03-16-0136-R
Bursac T, Gralnick JA, Gescher J. Acetoin production via unbalanced fermentation in Shewanella oneidensis. Biotechnology and Bioengineering. 2017 Jun 1;114(6):1283-1289. Available from, DOI: 10.1002/bit.26243
Butler EE, Datta A, Flores-Moreno H, Chen M, Wythers KR, Fazayeli F et al. Mapping local and global variability in plant trait distributions. Proceedings of the National Academy of Sciences of the United States of America. 2017 Dec 19;114(51):E10937-E10946. Available from, DOI: 10.1073/pnas.1708984114
Bzdrenga J, Daudé D, Rémy B, Jacquet P, Plener L, Elias M et al. Biotechnological applications of quorum quenching enzymes. Chemico-Biological Interactions. 2017 Apr 1;267:104-115. Available from, DOI: 10.1016/j.cbi.2016.05.028
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CBS 2017 Publications Page 6 of 41
Campbell M, Humanki J, Zierhut H. A novel approach to screening for familial hypercholesterolemia in a large public venue. Journal of Community Genetics. 2017 Jan 1;8(1):35-44. Available from, DOI: 10.1007/s12687-016-0285-1
Carbone I, White JB, Miadlikowska J, Arnold AE, Miller MA, Kauff F et al. T-BAS: Tree-Based Alignment Selector toolkit for phylogenetic-based placement, alignment downloads and metadata visualization: An example with the Pezizomycotina tree of life. Bioinformatics. 2017 Apr 15;33(8):1160-1168. Available from, DOI: 10.1093/bioinformatics/btw808
Cavender-bares J, Gamon JA, Hobbie SE, Madritch MD, Meireles JE, Schweiger AK et al. Harnessing plant spectra to integrate the biodiversity sciences across biological and spatial scales. American Journal of Botany. 2017 Jul 1;104(7):966-969. Available from, DOI: 10.3732/ajb.1700061
Čermák T, Curtin SJ, Gil-Humanes J, Čegan R, Kono TJY, Konečná E et al. A multipurpose toolkit to enable advanced genome engineering in plants. Plant Cell. 2017 Jun 1;29(6):1196-1217. Available from, DOI: 10.1105/tpc.16.00922
Čermák T, Curtin SJ. Design and assembly of crispr/cas9 reagents for gene knockout, targeted insertion, and replacement in wheat. In Methods in Molecular Biology. Humana Press Inc.2017. p. 187-212. (Methods in Molecular Biology). Available from, DOI: 10.1007/978-1-4939-7337-8_12
Chambers MC, Jagtap PD, Johnson JE, McGowan T, Kumar P, Onsongo G et al. An accessible proteogenomics informatics resource for cancer researchers. Cancer Research. 2017 Nov 1;77(21):e43-e46. Available from, DOI: 10.1158/0008-5472.CAN-17-0331
Chan CH, Levar CE, Jiménez-Otero F, Bond DR. Genome scale mutational analysis of Geobacter sulfurreducens reveals distinct molecular mechanisms for respiration and sensing of poised electrodes versus Fe(III) oxides. Journal of bacteriology. 2017 Jan 1;199(19). e00340-17. Available from, DOI: 10.1128/JB.00340-17
Chang JW, Yeh HS, Yong J. Alternative polyadenylation in human diseases. Endocrinology and Metabolism. 2017 Dec 1;32(4):413-421. Available from, DOI: 10.3803/EnM.2017.32.4.413
Chantha SC, Herman AC, Castric V, Vekemans X, Marande W, Schoen DJ. The unusual S locus of Leavenworthia is composed of two sets of paralogous loci. New Phytologist. 2017 Dec 1;216(4):1247-1255. Available from, DOI: 10.1111/nph.14764
Chatzi KE, Sardis MF, Tsirigotaki A, Koukaki M, Šoštarić N, Konijnenberg A et al. Preprotein mature domains contain translocase targeting signals that are essential for secretion. Journal of Cell Biology. 2017 May 1;216(5):1357-1369. Available from, DOI: 10.1083/jcb.201609022
Chau LM, Goodisman MAD. Gene duplication and the evolution of phenotypic diversity in insect societies. Evolution. 2017 Dec 1;71(12):2871-2884. Available from, DOI: 10.1111/evo.13356
Chaudhury I, Koepp DM. Degradation of Mrc1 promotes recombination-mediated restart of stalled replication forks. Nucleic acids research. 2017 Mar 17;45(5):2558-2570. Available from, DOI: 10.1093/nar/gkw1249
Chen A, Veach PMC, Schoonveld C, Zierhut H. Seekers, Finders, Settlers, and Stumblers: Identifying the Career Paths of Males in the Genetic Counseling Profession. Journal of genetic counseling. 2017 Oct 1;26(5):948-962. Available from, DOI: 10.1007/s10897-017-0071-1
Chen D, Tavana O, Chu B, Erber L, Chen Y, Baer R et al. NRF2 Is a Major Target of ARF in p53-Independent Tumor Suppression. Molecular Cell. 2017 Oct 5;68(1):224-232.e4. Available from, DOI: 10.1016/j.molcel.2017.09.009
Chew TG, Huang J, Palani S, Sommese R, Kamnev A, Hatano T et al. Actin turnover maintains actin filament homeostasis during cytokinetic ring contraction. Journal of Cell Biology. 2017 Sep 1;216(9):2657-2667. Available from, DOI: 10.1083/jcb.201701104
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Cho JH, Swanson CJ, Chen J, Li A, Lippert LG, Boye SE et al. The GCaMP-R Family of Genetically Encoded Ratiometric Calcium Indicators. ACS chemical biology. 2017 Apr 21;12(4):1066-1074. Available from, DOI: 10.1021/acschembio.6b00883
Christenson JK, Jensen MR, Goblirsch BR, Mohamed F, Zhang W, Wilmot CM et al. Active multienzyme assemblies for long-chain olefinic hydrocarbon biosynthesis. Journal of bacteriology. 2017 May 1;199(9). e00890-16. Available from, DOI: 10.1128/JB.00890-16
Christenson JK, Richman JE, Jensen MR, Neufeld JY, Wilmot CM, Wackett LP. β-Lactone synthetase found in the olefin biosynthesis pathway. Biochemistry. 2017 Jan 1;56(2):348-351. Available from, DOI: 10.1021/acs.biochem.6b01199
Christenson JK, Robinson SL, Engel TA, Richman JE, Kim AN, Wackett LP. OleB from Bacterial Hydrocarbon Biosynthesis Is a β-Lactone Decarboxylase That Shares Key Features with Haloalkane Dehalogenases. Biochemistry. 2017 Oct 10;56(40):5278-5287. Available from, DOI: 10.1021/acs.biochem.7b00667
Chuang MF, Kam YC, Bee MA. Territorial olive frogs display lower aggression towards neighbours than strangers based on individual vocal signatures. Animal Behaviour. 2017 Jan 1;123:217-228. Available from, DOI: 10.1016/j.anbehav.2016.11.001
Chun CL, Peller JR, Shively D, Byappanahalli MN, Whitman RL, Staley C et al. Virulence and biodegradation potential of dynamic microbial communities associated with decaying Cladophora in Great Lakes. Science of the Total Environment. 2017 Jan 1;574:872-880. Available from, DOI: 10.1016/j.scitotenv.2016.09.107
Clark M, Tilman D. Comparative analysis of environmental impacts of agricultural production systems, agricultural input efficiency, and food choice. Environmental Research Letters. 2017 Jun 16;12(6). 064016. Available from, DOI: 10.1088/1748-9326/aa6cd5
Clarke DJ. Cell surface damage activates a cell cycle checkpoint (comment on DOI: 10.1002/bies.201600210). BioEssays. 2017 Apr 1;39(4). 1700022. Available from, DOI: 10.1002/bies.201700022
Clarke DJ, Azuma Y. Non-catalytic roles of the topoisomerase IIα C-terminal domain. International Journal of Molecular Sciences. 2017 Nov 17;18(11). 2438. Available from, DOI: 10.3390/ijms18112438
Clarke TH, Gomez A, Singh H, Nelson KE, Brinkac LM. Integrating the microbiome as a resource in the forensics toolkit. Forensic Science International: Genetics. 2017 Sep 1;30:141-147. Available from, DOI: 10.1016/j.fsigen.2017.06.008
Cline LC, Zak DR, Upchurch RA, Freedman ZB, Peschel AR. Soil microbial communities and elk foraging intensity: implications for soil biogeochemical cycling in the sagebrush steppe. Ecology letters. 2017 Feb 1;20(2):202-211. Available from, DOI: 10.1111/ele.12722
Cline LC, Schilling JS, Menke J, Groenhof E, Kennedy PG. Ecological and functional effects of fungal endophytes on wood decomposition. Functional Ecology. 2018 Jan 1;32(1):181-191. Available from, DOI: 10.1111/1365-2435.12949
Cole AJ, Kuchnia AJ, Beckman LM, Jahansouz C, Mager JR, Sibley SD et al. Long-Term Body Composition Changes in Women Following Roux-en-Y Gastric Bypass Surgery. Journal of Parenteral and Enteral Nutrition. 2017 May 1;41(4):583-591. Available from, DOI: 10.1177/0148607115625621
Collins M, Bowser R. Molecular Mechanisms of Amyotrophic Lateral Sclerosis. In Molecular and Cellular Therapies for Motor Neuron Diseases. Elsevier Inc.2017. p. 61-99. Available from, DOI: 10.1016/B978-0-12-802257-3.00004-3
Costas AMG, Poudel S, Miller AF, Schut GJ, Ledbetter RN, Fixen KR et al. Defining electron bifurcation in the electron-transferring flavoprotein family. Journal of Bacteriology. 2017 Jan 1;199(21). e00440-17. Available from, DOI: 10.1128/JB.00440-17
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Costea PI, Hildebrand F, Manimozhiyan A, Bäckhed F, Blaser MJ, Bushman FD et al. Enterotypes in the landscape of gut microbial community composition. Nature Microbiology. 2017 Jan 1;3(1):8-16. Available from, DOI: 10.1038/s41564-017-0072-8
Cotner JB. Nitrogen is Not a 'House of Cards'. Environmental Science and Technology. 2017 Jan 3;51(1). Available from, DOI: 10.1021/acs.est.6b04890
Cotner JB, Weinke AD, Biddanda BA. Great Lakes: Science can keep them great. Journal of Great Lakes Research. 2017 Oct 1;43(5):916-919. Available from, DOI: 10.1016/j.jglr.2017.07.002
Cotner S, Thompson S, Wright R. Do biology majors really differ from non–STEM majors? CBE Life Sciences Education. 2017 Sep 1;16(3). ar48. Available from, DOI: 10.1187/cbe.16-11-0329
Cotner S, Ballen CJ. Can mixed assessment methods make biology classes more equitable? PLoS ONE. 2017 Dec 1;12(12). e0189610. Available from, DOI: 10.1371/journal.pone.0189610
Cotrozzi L, Couture JJ, Cavender-Bares J, Kingdon CC, Fallon B, Pilz G et al. Using foliar spectral properties to assess the effects of drought on plant water potential. Tree Physiology. 2017 Nov 1;37(11):1582-1591. Available from, DOI: 10.1093/treephys/tpx106
Craft ME, Vial F, Miguel E, Cleaveland S, Ferdinands A, Packer C. Interactions between domestic and wild carnivores around the greater Serengeti ecosystem. Animal Conservation. 2017 Apr 1;20(2):193-204. Available from, DOI: 10.1111/acv.12305
Cragun D, Zierhut H. Development of FOCUS-GC: Framework for Outcomes of Clinical Communication Services in Genetic Counseling. Journal of genetic counseling. 2018 Feb 1;27(1):33-58. Available from, DOI: 10.1007/s10897-017-0145-0
Crisp PA, Ganguly DR, Smith AB, Murray KD, Estavillo GM, Searle I et al. Rapid recovery gene downregulation during excess-light stress and recovery in arabidopsis. Plant Cell. 2017 Jan 1;29(8):1836-1863. Available from, DOI: 10.1105/tpc.16.00828
Cubino JP, Pagès DR, Palom AR, Torrent JF. Geoactiva’t. Establecer sinergias entre diferentes niveles educativos. Documents d'Analisi Geografica. 2017 Jan 1;63(3):641-647. Available from, DOI: 10.5565/rev/dag.484
Curtin SJ, Tiffin P, Guhlin J, Trujillo D, Burghart L, Atkins P et al. Validating genome-wide association candidates controlling quantitative variation in nodulation. Plant physiology. 2017 Feb 1;173(2):921-931. Available from, DOI: 10.1104/pp.16.01923
David AS, Seabloom EW, May G. Disentangling environmental and host sources of fungal endophyte communities in an experimental beachgrass study. Molecular ecology. 2017 Nov 1;26(21):6157-6169. Available from, DOI: 10.1111/mec.14354
Deacon NJ, Grossman JJ, Schweiger AK, Armour I, Cavender-Bares J. Genetic, morphological, and spectral characterization of relictual Niobrara River hybrid aspens (Populus × smithii). American Journal of Botany. 2017 Dec 1;104(12):1878-1890. Available from, DOI: 10.3732/ajb.1700268
Dean AM, Lehman C, Yi X. Fluctuating selection in the Moran. Genetics. 2017 Mar 1;205(3):1271-1283. Available from, DOI: 10.1534/genetics.116.192914
Deane-Coe KK, Stanton D. Functional ecology of cryptogams: scaling from bryophyte, lichen, and soil crust traits to ecosystem processes. New Phytologist. 2017 Feb 1;213(3):993-995. Available from, DOI: 10.1111/nph.14408
de Beer D, Weber M, Chennu A, Hamilton T, Lott C, Macalady J et al. Oxygenic and anoxygenic photosynthesis in a microbial mat from an anoxic and sulfidic spring. Environmental microbiology. 2017 Mar 1;19(3):1251-1265. Available from, DOI: 10.1111/1462-2920.13654
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De Guzman ME, Santiago LS, Schnitzer SA, Álvarez-Cansino L. Trade-offs between water transport capacity and drought resistance in neotropical canopy liana and tree species. Tree physiology. 2017 Oct 1;37(10):1404-1414. Available from, DOI: 10.1093/treephys/tpw086
DeLong JP, Brassil CE, Erickson EK, Forbes VE, Moriyama EN, Riekhof WR. Dynamic thermal reaction norms and body size oscillations challenge explanations of the temperature-size rule. Evolutionary Ecology Research. 2017 May 1;18(1):293-303.
De Montaudouin X, Accolla C. Is apparent low productivity of the invasive marine mollusc Crepidula fornicata linnaeus, 1758 related to biased age determination? Aquatic Invasions. 2017 Jan 1;12(4):459-468. Available from, DOI: 10.3391/ai.2017.12.4.04
Di DYW, Lee A, Jang J, Han D, Hur HG. Season-specific occurrence of potentially pathogenic Vibrio spp. on the southern coast of South Korea. Applied and environmental microbiology. 2017 Jan 1;83(3). e02680-16. Available from, DOI: 10.1128/AEM.02680-16
Di DYW, Jang J, Unno T, Hur HG. Emergence of Klebsiella variicola positive for NDM-9, a variant of New Delhi metallo-β-lactamase, in an urban river in South Korea. Journal of Antimicrobial Chemotherapy. 2017 Jan 1;72(4):1063-1067. Available from, DOI: 10.1093/jac/dkw547
Dickson JH, Oeggl K, Stanton D. 'Forest Moss': No part of the European Neanderthal diet. Antiquity. 2017 Oct 1;91(359). e3. Available from, DOI: 10.15184/aqy.2017.165
Ding Q, Kazlauskas RJ. Improving Pseudomonas fluorescens esterase for hydrolysis of lactones. Catalysis Science and Technology. 2017 Jan 1;7(20):4756-4765. Available from, DOI: 10.1039/c7cy01770g
Dobbels AA, Michno JM, Campbell BW, Virdi KS, Stec AO, Muehlbauer GJ et al. An induced chromosomal translocation in soybean disrupts a KASI ortholog and is associated with a high-sucrose and low-oil seed phenotype. G3: Genes, Genomes, Genetics. 2017 Apr 1;7(4):1215-1223. Available from, DOI: 10.1534/g3.116.038596
Dolph CL, Hansen AT, Finlay JC. Flow-related dynamics in suspended algal biomass and its contribution to suspended particulate matter in an agricultural river network of the Minnesota River Basin, USA. Hydrobiologia. 2017 Jan 1;785(1):127-147. Available from, DOI: 10.1007/s10750-016-2911-7
Douglas SM, Chubiz LM, Harcombe WR, Marx CJ. Identification of the potentiating mutations and synergistic epistasis that enabled the evolution of inter-species cooperation. PLoS ONE. 2017 May 1;12(5). e0174345. Available from, DOI: 10.1371/journal.pone.0174345
Driscoll WW, Travisano M. Synergistic cooperation promotes multicellular performance and unicellular free-rider persistence. Nature Communications. 2017 Jun 5;8. 15707. Available from, DOI: 10.1038/ncomms15707
Du M, Zhao J, Tzeng DTW, Liu Y, Deng L, Yang T et al. MYC2 orchestrates a hierarchical transcriptional cascade that regulates jasmonate-mediated plant immunity in tomato. Plant Cell. 2017 Jan 1;29(8):1883-1906. Available from, DOI: 10.1105/tpc.16.00953
Du Z, Chen Y, Li X. Quantitative proteomic analyses of the microbial degradation of estrone under various background nitrogen and carbon conditions. Water Research. 2017 Jan 1;123:361-368. Available from, DOI: 10.1016/j.watres.2017.06.070
Duffy CM, Xu H, Nixon JP, Bernlohr DA, Butterick TA. Identification of a fatty acid binding protein4-UCP2 axis regulating microglial mediated neuroinflammation. Molecular and Cellular Neuroscience. 2017 Apr 1;80:52-57. Available from, DOI: 10.1016/j.mcn.2017.02.004
Egea J, Fabregat I, Frapart YM, Ghezzi P, Görlach A, Kietzmann T et al. European contribution to the study of ROS: A summary of the findings and prospects for the future from the COST action BM1203 (EU-ROS). Redox Biology. 2017 Oct 1;13:94-162. Available from, DOI: 10.1016/j.redox.2017.05.007
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El-Gammal M, Abou-Shanab R, Angelidaki I, Omar B, Sveding PV, Karakashev DB et al. High efficient ethanol and VFA production from gas fermentation: Effect of acetate, gas and inoculum microbial composition. Biomass and Bioenergy. 2017 Jan 1;105:32-40. Available from, DOI: 10.1016/j.biombioe.2017.06.020
Ellinger J, Schmidt-Dannert C. Construction of a BioBrick™ compatible vector system for Rhodococcus. Plasmid. 2017 Mar 1;90:1-4. Available from, DOI: 10.1016/j.plasmid.2017.01.004
El-Sheekh M, Abomohra AEF, El-Azim MA, Abou-Shanab R. Effet de la température d’incubation sur la croissance et le profil en acides gras de la microalgue Scenedesmus acutus à mettre en rapport avec une production potentielle de biodiesel. Biotechnology, Agronomy and Society and Environment. 2017 Jan 1;21(4):233-239.
Enders TA, Frick EM, Strader LC. An Arabidopsis kinase cascade influences auxin-responsive cell expansion. Plant Journal. 2017 Oct 1;92(1):68-81. Available from, DOI: 10.1111/tpj.13635
Engelhart AE. RNA imaging: A tale of two G-quadruplexes. Nature Chemical Biology. 2017 Nov 1;13(11):1140-1141. Available from, DOI: 10.1038/nchembio.2492
Escalante AE, Travisano M. Editorial: Conflict and cooperation in microbial societies. Frontiers in Microbiology. 2017 Feb 3;8(FEB). 141. Available from, DOI: 10.3389/fmicb.2017.00141
Escalante DE, Aukema KG, Wackett LP, Aksan A. Simulation of the Bottleneck Controlling Access into a Rieske Active Site: Predicting Substrates of Naphthalene 1,2-Dioxygenase. Journal of Chemical Information and Modeling. 2017 Mar 27;57(3):550-561. Available from, DOI: 10.1021/acs.jcim.6b00469
Evans RL, Latham JA, Xia Y, Klinman JP, Wilmot CM. Nuclear Magnetic Resonance Structure and Binding Studies of PqqD, a Chaperone Required in the Biosynthesis of the Bacterial Dehydrogenase Cofactor Pyrroloquinoline Quinone. Biochemistry. 2017 May 30;56(21):2735-2746. Available from, DOI: 10.1021/acs.biochem.7b00247
Fernandez CW, Nguyen NH, Stefanski A, Han Y, Hobbie SE, Montgomery RA et al. Ectomycorrhizal fungal response to warming is linked to poor host performance at the boreal-temperate ecotone. Global Change Biology. 2017 Apr 1;23(4):1598-1609. Available from, DOI: 10.1111/gcb.13510
Fong Y, Hackett PB. Acceptance and Access to Gene Editing: Science and Our Obligations to Mankind. Molecular Therapy. 2017 Jan 4;25(1):1-2. Available from, DOI: 10.1016/j.ymthe.2016.12.012
Forbes VE, Salice CJ, Birnir B, Bruins RJF, Calow P, Ducrot V et al. A framework for predicting impacts on ecosystem services from (sub)organismal responses to chemicals. Environmental Toxicology and Chemistry. 2017 Apr 1;36(4):845-859. Available from, DOI: 10.1002/etc.3720
Fountain-Jones NM, Packer C, Troyer JL, VanderWaal K, Robinson S, Jacquot M et al. Linking social and spatial networks to viral community phylogenetics reveals subtype-specific transmission dynamics in African lions. Journal of Animal Ecology. 2017 Oct 1;86(6):1469-1482. Available from, DOI: 10.1111/1365-2656.12751
Freeman MF, Helf MJ, Bhushan A, Morinaka BI, Piel J. Seven enzymes create extraordinary molecular complexity in an uncultivated bacterium. Nature chemistry. 2017 Apr 1;9(4):387-395. Available from, DOI: 10.1038/nchem.2666
French WE, Vondracek B, Ferrington LC, Finlay JC, Dieterman DJ. Brown trout (Salmo trutta) growth and condition along a winter thermal gradient in temperate streams. Canadian Journal of Fisheries and Aquatic Sciences. 2017 Jan 1;74(1):56-64. Available from, DOI: 10.1139/cjfas-2016-0005
Freschet GT, Valverde-Barrantes OJ, Tucker CM, Craine JM, Mccormack ML, Violle C et al. Climate, soil and plant functional types as drivers of global fine-root trait variation. Journal of Ecology. 2017 Sep 1;105(5):1182-1196. Available from, DOI: 10.1111/1365-2745.12769
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Frischknecht R, Benetto E, Dandres T, Heijungs R, Roux C, Schrijvers D et al. LCA and decision making: when and how to use consequential LCA; 62nd LCA forum, Swiss Federal Institute of Technology, Zürich, 9 September 2016. International Journal of Life Cycle Assessment. 2017 Feb 1;22(2):296-301. Available from, DOI: 10.1007/s11367-016-1248-9
Fu Z, Epstein B, Kelley JL, Zheng Q, Bergland AO, Castillo Carrillo CI et al. Using NextRAD sequencing to infer movement of herbivores among host plants. PLoS ONE. 2017 May 1;12(5). 0177742. Available from, DOI: 10.1371/journal.pone.0177742
Fuglestad A, Prunuske J, Regal R, Hunter C, Boulger J, Prunuske A. Rural family medicine outcomes at the University of Minnesota Medical School Duluth. Family Medicine. 2017 May 1;49(5):388-393.
Fujii S, Mori AS, Koide D, Makoto K, Matsuoka S, Osono T et al. Disentangling relationships between plant diversity and decomposition processes under forest restoration. Journal of Applied Ecology. 2017 Feb 1;54(1):80-90. Available from, DOI: 10.1111/1365-2664.12733
Funk JL, Larson JE, Ames GM, Butterfield BJ, Cavender-Bares J, Firn J et al. Revisiting the Holy Grail: using plant functional traits to understand ecological processes. Biological Reviews of the Cambridge Philosophical Society. 2017 May 1;92(2):1156-1173. Available from, DOI: 10.1111/brv.12275
Gage JL, Jarquin D, Romay C, Lorenz A, Buckler ES, Kaeppler S et al. The effect of artificial selection on phenotypic plasticity in maize. Nature communications. 2017 Dec 1;8(1). 1348. Available from, DOI: 10.1038/s41467-017-01450-2
Galic N, Forbes VE. Effects of temperature on the performance of a freshwater amphipod. Hydrobiologia. 2017 Jan 1;785(1):35-46. Available from, DOI: 10.1007/s10750-016-2901-9
Galic N, Forbes VE. The role of Dynamic Energy Budget theory in predictive modeling of stressor impacts on ecological systems: Comment on: “Physics of metabolic organization” by Marko Jusup et al. Physics of Life Reviews. 2017 Mar 1;20:43-45. Available from, DOI: 10.1016/j.plrev.2017.01.008
Galic N, Grimm V, Forbes VE. Impaired ecosystem process despite little effects on populations: modeling combined effects of warming and toxicants. Global Change Biology. 2017 Aug 1;23(8):2973-2989. Available from, DOI: 10.1111/gcb.13581
Ganguly DR, Crisp PA, Eichten SR, Pogson BJ. The arabidopsis DNA methylome is stable under transgenerational drought stress. Plant physiology. 2017 Dec 1;175(4):1893-1912. Available from, DOI: 10.1104/pp.17.00744
García León MM, Martínez Izquierdo L, Mello FNA, Powers JS, Schnitzer SA. Lianas reduce community-level canopy tree reproduction in a Panamanian forest. Journal of Ecology. 2018 Mar 1;106(2):737-745. Available from, DOI: 10.1111/1365-2745.12807
Gemmell AP, Veach PMC, MacFarlane I, Riesgraf R, LeRoy BS. “If It Helps, It’s Worth a Try”: an Investigation of Perceptions and Attitudes about Genetic Counseling among Southern Manitoba Hutterites. Journal of Genetic Counseling. 2017 Dec 1;26(6):1357-1371. Available from, DOI: 10.1007/s10897-017-0121-8
Gevers D, Kugathasan S, Knights D, Kostic AD, Knight R, Xavier RJ. A Microbiome Foundation for the Study of Crohn's Disease. Cell Host and Microbe. 2017 Mar 8;21(3):301-304. Available from, DOI: 10.1016/j.chom.2017.02.012
Gil-Humanes J, Wang Y, Liang Z, Shan Q, Ozuna CV, Sánchez-León S et al. High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9. Plant Journal. 2017 Mar 1;89(6):1251-1262. Available from, DOI: 10.1111/tpj.13446
Gill AL, Giasson MA, Yu R, Finzi AC. Deep peat warming increases surface methane and carbon dioxide emissions in a black spruce-dominated ombrotrophic bog. Global Change Biology. 2017 Dec 1;23(12):5398-5411. Available from, DOI: 10.1111/gcb.13806
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Ginger LJ, Zimmer KD, Herwig BR, Hanson MA, Hobbs WO, Small GE et al. Watershed vs. within-lake drivers of nitrogen: Phosphorus dynamics in shallow lakes: Phosphorus. Ecological Applications. 2017 Oct 1;27(7):2155-2169. Available from, DOI: 10.1002/eap.1599
Gnanadesikan GE, Pearse WD, Shaw AK. Evolution of mammalian migrations for refuge, breeding, and food. Ecology and Evolution. 2017 Jan 1;7(15):5891-5900. Available from, DOI: 10.1002/ece3.3120
Godwin CM, Whitaker EA, Cotner JB. Growth rate and resource imbalance interactively control biomass stoichiometry and elemental quotas of aquatic bacteria. Ecology. 2017 Mar 1;98(3):820-829. Available from, DOI: 10.1002/ecy.1705
Goldberg EE, Otto SP, Vamosi JC, Mayrose I, Sabath N, Ming R et al. Macroevolutionary synthesis of flowering plant sexual systems. Evolution. 2017 Apr 1;71(4):898-912. Available from, DOI: 10.1111/evo.13181
Gomez A, Nelson KE. The Oral Microbiome of Children: Development, Disease, and Implications Beyond Oral Health. Microbial ecology. 2017 Feb 1;73(2):492-503. Available from, DOI: 10.1007/s00248-016-0854-1
Gomez A. Loss of gut microbiome diversity in industrialized societies: Alternative views (comment on DOI 10.1002/bies.201600145). BioEssays. 2017 Mar 1;39(3). 1700005. Available from, DOI: 10.1002/bies.201700005
Gomez A, Espinoza JL, Harkins DM, Leong P, Saffery R, Bockmann M et al. Host Genetic Control of the Oral Microbiome in Health and Disease. Cell Host and Microbe. 2017 Sep 13;22(3):269-278.e3. Available from, DOI: 10.1016/j.chom.2017.08.013
Gorle S, Pan Y, Sun Z, Shlyakhtenko LS, Harris RS, Lyubchenko YL et al. Computational Model and Dynamics of Monomeric Full-Length APOBEC3G. ACS Central Science. 2017 Nov 22;3(11):1180-1188. Available from, DOI: 10.1021/acscentsci.7b00346
Gravina F, Dobrzanski T, Olchanheski LR, Galvão CW, Reche PM, Pileggi SA et al. Metabolic Interference of sod gene mutations on catalase activity in Escherichia coli exposed to Gramoxone® (paraquat) herbicide. Ecotoxicology and Environmental Safety. 2017 May 1;139:89-96. Available from, DOI: 10.1016/j.ecoenv.2017.01.027
Green KM, Glineburg MR, Kearse MG, Flores BN, Linsalata AE, Fedak SJ et al. RAN translation at C9orf72-associated repeat expansions is selectively enhanced by the integrated stress response. Nature Communications. 2017 Dec 1;8(1). 2005. Available from, DOI: 10.1038/s41467-017-02200-0
Grettenberger CL, Pearce AR, Bibby KJ, Jones DS, Burgos WD, Macalady JL. Efficient low-pH iron removal by a microbial iron oxide mound ecosystem at Scalp Level Run. Applied and Environmental Microbiology. 2017 Apr 1;83(7). e00015-17. Available from, DOI: 10.1128/AEM.00015-17
Grieneisen LE, Livermore J, Alberts S, Tung J, Archie EA. Group living and male dispersal predict the core gut microbiome in wild baboons. Integrative and comparative biology. 2017 Oct 1;57(4):770-785. Available from, DOI: 10.1093/icb/icx046
Groffman PM, Cadenasso ML, Cavender-Bares J, Childers DL, Grimm NB, Grove JM et al. Moving Towards a New Urban Systems Science. Ecosystems. 2017 Jan 1;20(1):38-43. Available from, DOI: 10.1007/s10021-016-0053-4
Groffman PM, Avolio M, Cavender-Bares J, Bettez ND, Grove JM, Hall SJ et al. Ecological homogenization of residential macrosystems. Nature Ecology and Evolution. 2017 Jun 22;1(7). 0191. Available from, DOI: 10.1038/s41559-017-0191
Grossenbacher DL, Brandvain Y, Auld JR, Burd M, Cheptou PO, Conner JK et al. Self-compatibility is over-represented on islands. New Phytologist. 2017 Jul 1;215(1):469-478. Available from, DOI: 10.1111/nph.14534
Grotewold E, Springer NM. News from the plant world: Listening to transcription. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 2017 Jan 1;1860(1):1-2. Available from, DOI: 10.1016/j.bbagrm.2016.11.004
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Guendouze A, Plener L, Bzdrenga J, Jacquet P, Rémy B, Elias M et al. Effect of quorum quenching lactonase in clinical isolates of pseudomonas aeruginosa and comparison with quorum sensing inhibitors. Frontiers in Microbiology. 2017 Feb 14;8(FEB). 227. Available from, DOI: 10.3389/fmicb.2017.00227
Guerrero CR, Jagtap PD, Johnson JE, Griffin TJ. Chapter 13: Using Galaxy for Proteomics. In Proteome Informatics. 5 ed. Royal Society of Chemistry. 2017. p. 289-320. (New Developments in Mass Spectrometry; 5). Available from, DOI: 10.1039/9781782626732-00289
Guerrero-Ramírez NR, Craven D, Reich PB, Ewel JJ, Isbell F, Koricheva J et al. Diversity-dependent temporal divergence of ecosystem functioning in experimental ecosystems. Nature Ecology and Evolution. 2017 Nov 1;1(11):1639-1642. Available from, DOI: 10.1038/s41559-017-0325-1
Guhlin J, Silverstein KAT, Zhou P, Tiffin P, Young ND. ODG: Omics database generator - a tool for generating, querying, and analyzing multi-omics comparative databases to facilitate biological understanding. BMC bioinformatics. 2017 Aug 10;18(1). 367. Available from, DOI: 10.1186/s12859-017-1777-7
Gupte TM, Malik RU, Sommese RF, Ritt M, Sivaramakrishnan S. Priming GPCR signaling through the synergistic effect of two G proteins. Proceedings of the National Academy of Sciences of the United States of America. 2017 Apr 4;114(14):3756-3761. Available from, DOI: 10.1073/pnas.1617232114
Haak DM, Fath BD, Forbes VE, Martin DR, Pope KL. Coupling ecological and social network models to assess “transmission” and “contagion” of an aquatic invasive species. Journal of Environmental Management. 2017 Apr 1;190:243-251. Available from, DOI: 10.1016/j.jenvman.2016.12.012
Hajimorad M, Gralnick JA. On recent advances in synthetic biology to enable programming bacteria for biosensing applications. In 2017 IEEE 60th International Midwest Symposium on Circuits and Systems, MWSCAS 2017. Vol. 2017-August. Institute of Electrical and Electronics Engineers Inc.2017. p. 1398-1401. 8053193. Available from, DOI: 10.1109/MWSCAS.2017.8053193
Hamilton TL, Havig J. Primary productivity of snow algae communities on stratovolcanoes of the Pacific Northwest. Geobiology. 2017 Mar 1;15(2):280-295. Available from, DOI: 10.1111/gbi.12219
Hamilton TL, Welander PV, Albrecht HL, Fulton JM, Schaperdoth I, Bird LR et al. Microbial communities and organic biomarkers in a Proterozoic-analog sinkhole. Geobiology. 2017 Nov 1;15(6):784-797. Available from, DOI: 10.1111/gbi.12252
Harpole WS, Sullivan LL, Lind EM, Firn J, Adler PB, Borer ET et al. Out of the shadows: multiple nutrient limitations drive relationships among biomass, light and plant diversity. Functional Ecology. 2017 Sep 1;31(9):1839-1846. Available from, DOI: 10.1111/1365-2435.12967
Hatsugai N, Igarashi D, Mase K, Lu Y, Tsuda Y, Chakravarthy S et al. A plant effector-triggered immunity signaling sector is inhibited by pattern-triggered immunity. EMBO Journal. 2017 Sep 15;36(18):2758-2769. Available from, DOI: 10.15252/embj.201796529
Haude K, McCarthy Veach P, LeRoy B, Zierhut H. Factors Influencing the Decision-Making Process and Long-Term Interpersonal Outcomes for Parents Who Undergo Preimplantation Genetic Diagnosis for Fanconi Anemia: a Qualitative Investigation. Journal of genetic counseling. 2017 Jun 1;26(3):640-655. Available from, DOI: 10.1007/s10897-016-0032-0
Havig JR, Grettenberger C, Hamilton TL. Geochemistry and microbial community composition across a range of acid mine drainage impact and implications for the Neoarchean-Paleoproterozoic transition. Journal of Geophysical Research: Biogeosciences. 2017 Jun 1;122(6):1404-1422. Available from, DOI: 10.1002/2016JG003594
Havig JR, Hamilton TL, Bachan A, Kump LR. Sulfur and carbon isotopic evidence for metabolic pathway evolution and a four-stepped Earth system progression across the Archean and Paleoproterozoic. Earth-Science Reviews. 2017 Nov 1;174:1-21. Available from, DOI: 10.1016/j.earscirev.2017.06.014
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Havig JR, Hamilton TL, McCormick M, McClure B, Sowers T, Wegter B et al. Water column and sediment stable carbon isotope biogeochemistry of permanently redox-stratified Fayetteville Green Lake, New York, U.S.A. Limnology and Oceanography. 2018 Mar 1;63(2):570-587. Available from, DOI: 10.1002/lno.10649
He Y, Wang M, Dukowic-Schulze S, Zhou A, Tiang CL, Shilo S et al. Genomic features shaping the landscape of meiotic double-strand-break hotspots in maize. Proceedings of the National Academy of Sciences of the United States of America. 2017 Nov 14;114(46):12231-12236. Available from, DOI: 10.1073/pnas.1713225114
Hebert SL, Fitzpatrick KR, McConnell SA, Cucak A, Yuan C, McLoon LK. Effects of retinoic acid signaling on extraocular muscle myogenic precursor cells in vitro. Experimental Cell Research. 2017 Dec 1;361(1):101-111. Available from, DOI: 10.1016/j.yexcr.2017.10.007
Heinsch SC, Otto-Hanson L, Hsu SY, Kinkel L, Smanski MJ. Genome sequences for Streptomyces spp. isolated from diseasesuppressive soils and long-term ecological research sites. Genome Announcements. 2017 Jan 1;5(23). e00493-17. Available from, DOI: 10.1128/genomeA.00493-17
Heisel T, Montassier E, Johnson A, Al-Ghalith G, Lin YW, Wei LN et al. High-fat diet changes fungal microbiomes and interkingdom relationships in the murine gut. mSphere. 2017 Sep 1;2(5). e00351-17. Available from, DOI: 10.1128/mSphere.00351-17
Hendershot JN, Read QD, Henning JA, Sanders NJ, Classen AT. Consistently inconsistent drivers of microbial diversity and abundance at macroecological scales. Ecology. 2017 Jul 1;98(7):1757-1763. Available from, DOI: 10.1002/ecy.1829
Hendricks S, Epstein B, Schönfeld B, Wiench C, Hamede R, Jones M et al. Conservation implications of limited genetic diversity and population structure in Tasmanian devils (Sarcophilus harrisii). Conservation Genetics. 2017 Aug 1;18(4):977-982. Available from, DOI: 10.1007/s10592-017-0939-5
Hennen J, Hur KH, Saunders CA, Luxton GWG, Mueller JD. Quantitative Brightness Analysis of Protein Oligomerization in the Nuclear Envelope. Biophysical Journal. 2017 Jul 11;113(1):138-147. Available from, DOI: 10.1016/j.bpj.2017.05.044
Hershey AE, Northington RM, Finlay JC, Peterson BJ. Stable Isotopes in Stream Food Webs. In Ecosystem Function. Vol. 2. Elsevier. 2017. p. 3-20. Available from, DOI: 10.1016/B978-0-12-813047-6.00001-2
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Hirsch CD, Springer NM. Transposable element influences on gene expression in plants. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 2017 Jan 1;1860(1):157-165. Available from, DOI: 10.1016/j.bbagrm.2016.05.010
Hite JL, Penczykowski RM, Shocket MS, Griebel KA, Strauss AT, Duffy MA et al. Allocation, not male resistance, increases male frequency during epidemics: a case study in facultatively sexual hosts. Ecology. 2017 Nov 1;98(11):2773-2783. Available from, DOI: 10.1002/ecy.1976
Hobbie SE, Finlay JC, Janke BD, Nidzgorski DA, Millet DB, Baker LA. Contrasting nitrogen and phosphorus budgets in urban watersheds and implications for managing urban water pollution. Proceedings of the National Academy of Sciences of the United States of America. 2017 Apr 18;114(16):4177-4182. Available from, DOI: 10.1073/pnas.1618536114
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Hodgson S, Griffin TJ, Reilly C, Harvey S, Witthuhn BA, Sandri BJ et al. Plasma sphingolipids in HIV-associated chronic obstructive pulmonary disease. BMJ Open Respiratory Research. 2017 Jan 1;4(1). e000180. Available from, DOI: 10.1136/bmjresp-2017-000180
Holme IB, Wendt T, Gil-Humanes J, Deleuran LC, Starker CG, Voytas DF et al. Evaluation of the mature grain phytase candidate HvPAPhy_a gene in barley (Hordeum vulgare L.) using CRISPR/Cas9 and TALENs. Plant molecular biology. 2017 Sep 1;95(1-2):111-121. Available from, DOI: 10.1007/s11103-017-0640-6
Hooker GW, Babu D, Myers M, Zierhut H, McAllister M. Standards for the Reporting of Genetic Counseling Interventions in Research and Other Studies (GCIRS): an NSGC Task Force Report. Journal of genetic counseling. 2017 Jun 1;26(3):355-360. Available from, DOI: 10.1007/s10897-017-0076-9
Hotaling S, Hood E, Hamilton TL. Microbial ecology of mountain glacier ecosystems: biodiversity, ecological connections and implications of a warming climate. Environmental microbiology. 2017 Aug 1;19(8):2935-2948. Available from, DOI: 10.1111/1462-2920.13766
Hu Y, Holway DA, Łukasik P, Chau L, Kay AD, LeBrun EG et al. By their own devices: invasive Argentine ants have shifted diet without clear aid from symbiotic microbes. Molecular ecology. 2017 Mar 1;26(6):1608-1630. Available from, DOI: 10.1111/mec.13991
Huang C, Kalodimos CG. Structures of Large Protein Complexes Determined by Nuclear Magnetic Resonance Spectroscopy. Annual Review of Biophysics. 2017 May 22;46:317-336. Available from, DOI: 10.1146/annurev-biophys-070816-033701
Huggins IJ, Bos T, Gaylord O, Jessen C, Lonquich B, Puranen A et al. The WNT target SP5 negatively regulates WNT transcriptional programs in human pluripotent stem cells. Nature communications. 2017 Dec 1;8(1). 1034. Available from, DOI: 10.1038/s41467-017-01203-1
Hulbert AC, Mitchell TS, Hall JM, Guiffre CM, Douglas DC, Warner DA. The effects of incubation temperature and experimental design on heart rates of lizard embryos. Journal of Experimental Zoology Part A: Ecological and Integrative Physiology. 2017 Jan 1;327(7):466-476. Available from, DOI: 10.1002/jez.2135
Hundt PJ, Hundt MJ, Staley C, Sadowsky MJ, Simons AM. The Diet and Gut Microbial Communities of Two Closely Related Combtooth Blennies, Chasmodes saburrae and Scartella cristata. Copeia. 2017 Jul 1;105(2):249-256. Available from, DOI: 10.1643/CI-16-505
Hungate BA, Barbier EB, Ando AW, Marks SP, Reich PB, van Gestel N et al. The economic value of grassland species for carbon storage. Science Advances. 2017 Apr 1;3(4). e1601880. Available from, DOI: 10.1126/sciadv.1601880
Hussain MK, Singh DK, Singh A, Asad M, Ansari MI, Shameem M et al. A Novel Benzocoumarin-Stilbene Hybrid as a DNA ligase i inhibitor with in vitro and in vivo anti-tumor activity in breast cancer models. Scientific Reports. 2017 Dec 1;7(1). 10715. Available from, DOI: 10.1038/s41598-017-10864-3
Hwang N, Eom T, Gupta SK, Jeong SY, Jeong DY, Kim YS et al. Genes and gut bacteria involved in luminal butyrate reduction caused by diet and loperamide. Genes. 2017 Dec 1;8(12). 350. Available from, DOI: 10.3390/genes8120350
Hyland KA, Aronovich EL, Olson ER, Bell JB, Rusten MU, Gunther R et al. Transgene Expression in Dogs after Liver-Directed Hydrodynamic Delivery of Sleeping Beauty Transposons Using Balloon Catheters. Human gene therapy. 2017 Jul 1;28(7):541-550. Available from, DOI: 10.1089/hum.2017.003
Ikeda T, Shimoda M, Ebrahimi D, VandeBerg JL, Harris RS, Koito A et al. Opossum APOBEC1 is a DNA mutator with retrovirus and retroelement restriction activity. Scientific Reports. 2017 Jan 1;7. 46719. Available from, DOI: 10.1038/srep46719
Isbell F, Gonzalez A, Loreau M, Cowles J, Díaz S, Hector A et al. Linking the influence and dependence of people on biodiversity across scales. Nature. 2017 May 31;546(7656):65-72. Available from, DOI: 10.1038/nature22899
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Isbell F, Adler PR, Eisenhauer N, Fornara D, Kimmel K, Kremen C et al. Benefits of increasing plant diversity in sustainable agroecosystems. Journal of Ecology. 2017 Jul 1;105(4):871-879. Available from, DOI: 10.1111/1365-2745.12789
Jacquet P, Hiblot J, Daudé D, Bergonzi C, Gotthard G, Armstrong N et al. Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase. Scientific Reports. 2017 Dec 1;7(1). 16745. Available from, DOI: 10.1038/s41598-017-16841-0
Jahansouz C, Staley C, Bernlohr DA, Sadowsky MJ, Khoruts A, Ikramuddin S. Sleeve gastrectomy drives persistent shifts in the gut microbiome. Surgery for Obesity and Related Diseases. 2017 Jun 1;13(6):916-924. Available from, DOI: 10.1016/j.soard.2017.01.003
Jain A, Pelle HS, Baughman WH, Henson JM. Conversion of ammonia-pretreated switchgrass to biofuel precursors by bacterial–fungal consortia under solid-state and submerged-state cultivation. Journal of Applied Microbiology. 2017 Apr 1;122(4):953-963. Available from, DOI: 10.1111/jam.13295
Jang J, Hur HG, Sadowsky MJ, Byappanahalli MN, Yan T, Ishii S. Environmental Escherichia coli: ecology and public health implications—a review. Journal of Applied Microbiology. 2017 Sep 1;123(3):570-581. Available from, DOI: 10.1111/jam.13468
Jang YJ, Seo SO, Kim SA, Li L, Kim TJ, Kim SC et al. Elimination of the cryptic plasmid in Leuconostoc citreum by CRISPR/Cas9 system. Journal of Biotechnology. 2017 Jun 10;251:151-155. Available from, DOI: 10.1016/j.jbiotec.2017.04.018
Janke BD, Finlay JC, Hobbie SE. Trees and Streets as Drivers of Urban Stormwater Nutrient Pollution. Environmental Science and Technology. 2017 Sep 5;51(17):9569-9579. Available from, DOI: 10.1021/acs.est.7b02225
Jaumann S, Snell-Rood EC. Trade-offs between fecundity and choosiness in ovipositing butterflies. Animal Behaviour. 2017 Jan 1;123:433-440. Available from, DOI: 10.1016/j.anbehav.2016.11.011
Jaumann S, Snell-Rood EC. Butterflies do not alter conspecific avoidance in response to variation in density. Integrative and comparative biology. 2017 Aug 1;57(2):396-406. Available from, DOI: 10.1093/icb/icx034
Jena S, Horn J, Suryanarayanan R, Friess W, Aksan A. Effects of Excipient Interactions on the State of the Freeze-Concentrate and Protein Stability. Pharmaceutical research. 2017 Feb 1;34(2):462-478. Available from, DOI: 10.1007/s11095-016-2078-y
Jena S, Aksan A. Effect of high DMSO concentration on albumin during freezing and vitrification. RSC Advances. 2017 Jan 1;7(69):43611-43620. Available from, DOI: 10.1039/c7ra07556a
Jensen MR, Goblirsch BR, Christenson JK, Esler MA, Mohamed FA, Wackett LP et al. OleA Glu117 is key to condensation of two fatty-acyl coenzyme A substrates in long-chain olefin biosynthesis. Biochemical Journal. 2017 Dec 1;474(23):3871-3886. Available from, DOI: 10.1042/BCJ20170642
Jeyasingh PD, Goos JM, Thompson SK, Godwin CM, Cotner JB. Ecological stoichiometry beyond redfield: An ionomic perspective on elemental homeostasis. Frontiers in Microbiology. 2017 Apr 25;8(APR). 722. Available from, DOI: 10.3389/fmicb.2017.00722
Jiang Y, Kalodimos CG. NMR Studies of Large Proteins. Journal of Molecular Biology. 2017 Aug 18;429(17):2667-2676. Available from, DOI: 10.1016/j.jmb.2017.07.007
Jiao Y, Peluso P, Shi J, Liang T, Stitzer MC, Wang B et al. Improved maize reference genome with single-molecule technologies. Nature. 2017 Jun 22;546(7659):524-527. Available from, DOI: 10.1038/nature22971
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CBS 2017 Publications Page 17 of 41
Johnson JR, Johnston BD, Delavari P, Thuras P, Clabots C, Sadowsky MJ. Phylogenetic backgrounds and virulenceassociated traits of Escherichia coli isolates from surface waters and diverse animals in Minnesota and Wisconsin. Applied and environmental microbiology. 2017 Dec 1;83(24). e01329-17. Available from, DOI: 10.1128/AEM.01329-17
Jones BJ, Bata Z, Kazlauskas RJ. Identical Active Sites in Hydroxynitrile Lyases Show Opposite Enantioselectivity and Reveal Possible Ancestral Mechanism. ACS Catalysis. 2017 Jun 2;7(6):4221-4229. Available from, DOI: 10.1021/acscatal.7b01108
Jones DS, Lapakko KA, Wenz ZJ, Olson MC, Roepke EW, Sadowsky MJ et al. Novel microbial assemblages dominate weathered sulfidebearing rock from copper-nickel deposits in the Duluth Complex, Minnesota, USA. Applied and environmental microbiology. 2017 Aug 1;83(16). e00909-17. Available from, DOI: 10.1128/AEM.00909-17
Jones DS, Roepke EW, Hua AA, Flood BE, Bailey JV. Complete genome sequence of Sulfuriferula sp. strain AH1, a sulfur- oxidizing autotroph isolated from weathered mine tailings from the Duluth Complex in Minnesota. Genome Announcements. 2017 Aug 1;5(32). e00673-17. Available from, DOI: 10.1128/genomeA.00673-17
Jones BJ, Lim HY, Huang J, Kazlauskas RJ. Comparison of Five Protein Engineering Strategies for Stabilizing an α/β-Hydrolase. Biochemistry. 2017 Dec 19;56(50):6521-6532. Available from, DOI: 10.1021/acs.biochem.7b00571
Jordan NR, Dorn KM, Smith TM, Wolf KE, Ewing PM, Fernandez AL et al. A cooperative governance network for crop genome editing: The success of governance networks in other areas could help to find common ground for applying genome editing in agriculture. EMBO Reports. 2017 Oct 1;18(10):1683-1687. Available from, DOI: 10.15252/embr.201744394
Jorge LR, Novotny V, Segar ST, Weiblen GD, Miller SE, Basset Y et al. Phylogenetic trophic specialization: a robust comparison of herbivorous guilds. Oecologia. 2017 Dec 1;185(4):551-559. Available from, DOI: 10.1007/s00442-017-3980-7
Kaieda Y, Masuda R, Nishida R, Shimell MJ, O'Connor MB, Ono H. Glue protein production can be triggered by steroid hormone signaling independent of the developmental program in Drosophila melanogaster. Developmental Biology. 2017 Oct 1;430(1):166-176. Available from, DOI: 10.1016/j.ydbio.2017.08.002
Kan Y, Batada NN, Hendrickson EA. Human somatic cells deficient for RAD52 are impaired for viral integration and compromised for most aspects of homology-directed repair. DNA Repair. 2017 Jul 1;55:64-75. Available from, DOI: 10.1016/j.dnarep.2017.04.006
Kan Y, Ruis B, Takasugi T, Hendrickson EA. Mechanisms of precise genome editing using oligonucleotide donors. Genome Research. 2017 Jul 1;27(7):1099-1111. Available from, DOI: 10.1101/gr.214775.116
Kang DW, Adams JB, Gregory AC, Borody T, Chittick L, Fasano A et al. Microbiota Transfer Therapy alters gut ecosystem and improves gastrointestinal and autism symptoms: An open-label study. Microbiome. 2017 Jan 1;5(1). 10. Available from, DOI: 10.1186/s40168-016-0225-7
Karl JP, Meydani M, Barnett JB, Vanegas SM, Barger K, Fu X et al. Fecal concentrations of bacterially derived vitamin K forms are associated with gut microbiota composition but not plasma or fecal cytokine concentrations in healthy adults. American Journal of Clinical Nutrition. 2017 Oct 1;106(4):1052-1061. Available from, DOI: 10.3945/ajcn.117.155424
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Kendig AE, Borer ET, Mitchell CE, Power AG, Seabloom EW. Characteristics and drivers of plant virus community spatial patterns in US west coast grasslands. Oikos. 2017 Sep 1;126(9):1281-1290. Available from, DOI: 10.1111/oik.04178
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CBS 2017 Publications Page 18 of 41
Khadka N, Milton RD, Shaw S, Lukoyanov D, Dean DR, Minteer SD et al. Mechanism of Nitrogenase H2 Formation by Metal-Hydride Protonation Probed by Mediated Electrocatalysis and H/D Isotope Effects. Journal of the American Chemical Society. 2017 Jan 1;139(38):13518-13524. Available from, DOI: 10.1021/jacs.7b07311
Khanna S, Vazquez-Baeza Y, González A, Weiss S, Schmidt B, Muñiz-Pedrogo DA et al. Changes in microbial ecology after fecal microbiota transplantation for recurrent C. difficile infection affected by underlying inflammatory bowel disease. Microbiome. 2017 Jan 1;5(1). 55. Available from, DOI: 10.1186/S40168-017-0269-3
Khoruts A, Hippen KL, Lemire AM, Holtan SG, Knights D, Young JAH. Toward revision of antimicrobial therapies in hematopoietic stem cell transplantation: target the pathogens, but protect the indigenous microbiota. Translational Research. 2017 Jan 1;179:116-125. Available from, DOI: 10.1016/j.trsl.2016.07.013
Kigar SL, Chang L, Guerrero CR, Sehring JR, Cuarenta A, Parker LL et al. N6-methyladenine is an epigenetic marker of mammalian early life stress. Scientific Reports. 2017 Dec 1;7(1). 18078. Available from, DOI: 10.1038/s41598-017-18414-7
Kim BJ, Chan DW, Jung SY, Chen Y, Qin J, Wang Y. The Histone Variant MacroH2A1 Is a BRCA1 Ubiquitin Ligase Substrate. Cell Reports. 2017 May 30;19(9):1758-1766. Available from, DOI: 10.1016/j.celrep.2017.05.027
Kittle AM, Anderson M, Avgar T, Baker JA, Brown GS, Hagens J et al. Landscape-level Wolf space use is correlated with prey abundance, ease of mobility, and the distribution of prey habitat. Ecosphere. 2017 Apr 1;8(4). e01783. Available from, DOI: 10.1002/ecs2.1783
Kne A, Zierhut H, Baldinger S, Swenson KK, Mink P, Veach PMC et al. Why Is Cancer Genetic Counseling Underutilized by Women Identified as at Risk for Hereditary Breast Cancer? Patient Perceptions of Barriers Following a Referral Letter. Journal of genetic counseling. 2017 Aug 1;26(4):697-715. Available from, DOI: 10.1007/s10897-016-0040-0
Köhler C, Springer N. Plant epigenomics-deciphering the mechanisms of epigenetic inheritance and plasticity in plants. Genome Biology. 2017 Jul 6;18(1). 132. Available from, DOI: 10.1186/s13059-017-1260-9
Kosobuski AW, Whitneyb A, Skildum A, Prunuske A. Development of an interdisciplinary pre-matriculation program designed to promote medical students' self efficacy. Medical Education Online. 2017 Jan 1;22(1). 1272835. Available from, DOI: 10.1080/10872981.2016.1272835
Kosobuski AW, Whitney A, Skildum A, Prunuske A. Development of an interdisciplinary pre-matriculation program designed to promote medical students' self efficacy. Medical Education Online. 2017 Jan 1;22(1). 1272835. Available from, DOI: 10.1080/10872981.2017.1272835
Kranzfelder P. DNA Barcoding for Species Identification of Insect Skins: A Test on Chironomidae (Diptera) Pupal Exuviae. Journal of Insect Science. 2017 Nov 1;17(6). Available from, DOI: 10.1093/jisesa/iex075
Krug CB, Schaepman ME, Shannon LJ, Cavender-Bares J, Cheung W, McIntyre PB et al. Observations, indicators and scenarios of biodiversity and ecosystem services change — a framework to support policy and decision-making. Current Opinion in Environmental Sustainability. 2017 Dec 1;29:198-206. Available from, DOI: 10.1016/j.cosust.2018.04.001
Krumholz EW, Libourel IGL. Thermodynamic Constraints Improve Metabolic Networks. Biophysical Journal. 2017 Aug 8;113(3):679-689. Available from, DOI: 10.1016/j.bpj.2017.06.018
Krzywkowski T, Ciftci S, Assadian F, Nilsson M, Punga T. Simultaneous singlecell in situ analysis of human adenovirus type 5 DNA and mRNA expression patterns in lytic and persistent infection. Journal of Virology. 2017 Jun 1;91(11). e00166-17. Available from, DOI: 10.1128/JVI.00166-17
Kuchnia A, Earthman C, Teigen L, Cole A, Mourtzakis M, Paris M et al. Evaluation of Bioelectrical Impedance Analysis in Critically Ill Patients: Results of a Multicenter Prospective Study. Journal of Parenteral and Enteral Nutrition. 2017 Sep 1;41(7):1131-1138. Available from, DOI: 10.1177/0148607116651063
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CBS 2017 Publications Page 19 of 41
Kuchnia AJ, Teigen LM, Cole AJ, Mulasi U, Gonzalez MC, Heymsfield SB et al. Phase Angle and Impedance Ratio: Reference Cut-Points From the United States National Health and Nutrition Examination Survey 1999–2004 From Bioimpedance Spectroscopy Data. Journal of Parenteral and Enteral Nutrition. 2017 Nov 1;41(8):1310-1315. Available from, DOI: 10.1177/0148607116670378
Kulbaba MW, Clocher IC, Harder LD. Inflorescence characteristics as function-valued traits: Analysis of heritability and selection on architectural effects. Journal of Systematics and Evolution. 2017 Nov 1;55(6):559-565. Available from, DOI: 10.1111/jse.12252
Lacroix C, Seabloom EW, Borer ET. Environmental nutrient supply directly alters plant traits but indirectly determines virus growth rate. Frontiers in Microbiology. 2017 Nov 6;8(NOV). 2116. Available from, DOI: 10.3389/fmicb.2017.02116
LaManna JA, Mangan SA, Alonso A, Bourg NA, Brockelman WY, Bunyavejchewin S et al. Plant diversity increases with the strength of negative density dependence at the global scale. Science. 2017 Jun 30;356(6345):1389-1392. Available from, DOI: 10.1126/science.aam5678
Latvis M, Mortimer SME, Morales-Briones DF, Torpey S, Uribe-Convers S, Jacobs SJ et al. Primers for castilleja and their utility across orobanchaceae: I. Chloroplast primers. Applications in Plant Sciences. 2017 Sep 1;5(9). 1700020. Available from, DOI: 10.3732/apps.1700020
Lee N, Ward JL, Vélez A, Micheyl C, Bee MA. Frogs Exploit Statistical Regularities in Noisy Acoustic Scenes to Solve Cocktail-Party-like Problems. Current Biology. 2017 Mar 6;27(5):743-750. Available from, DOI: 10.1016/j.cub.2017.01.031
Lee N, Mason AC. How spatial release from masking may fail to function in a highly directional auditory system. eLife. 2017 Apr 25;6. e20731. Available from, DOI: 10.7554/eLife.20731
Lee JH, Park SJ, Kim SW, Hariharasudhan G, Jung SM, Jun S et al. c-Fos-dependent miR-22 targets MDC1 and regulates DNA repair in terminally differentiated cells. Oncotarget. 2017 Jan 1;8(29):48204-48221. Available from, DOI: 10.18632/oncotarget.18389
Lee HR, Lee HW, Lee YW, Kazlauskas RJ, Park TH. Improved pretreatment of yellow poplar biomass using hot compressed water and enzymatically-generated peracetic acid. Biomass and Bioenergy. 2017 Jan 1;105:190-196. Available from, DOI: 10.1016/j.biombioe.2017.07.004
Lee HR, Kazlauskas RJ, Park TH. One-step pretreatment of yellow poplar biomass using peracetic acid to enhance enzymatic digestibility. Scientific Reports. 2017 Dec 1;7(1). 12216. Available from, DOI: 10.1038/s41598-017-12542-w
Lee HR, Kazlauskas RJ, Park TH. Mild pretreatment of yellow poplar biomass using sequential dilute acid and enzymatically-generated peracetic acid to enhance cellulase accessibility. Biotechnology and Bioprocess Engineering. 2017 Aug 1;22(4):405-412. Available from, DOI: 10.1007/s12257-017-0139-7
Lee S, Devamani T, Song HD, Sandhu M, Larsen A, Sommese R et al. Distinct structural mechanisms determine substrate affinity and kinase activity of protein kinase Cα. Journal of Biological Chemistry. 2017 Jan 1;292(39):16300-16309. Available from, DOI: 10.1074/jbc.M117.804781
Lee PG, Kim J, Kim EJ, Lee SH, Choi KY, Kazlauskas RJ et al. Biosynthesis of (-)-5-Hydroxy-equol and 5-Hydroxy-dehydroequol from Soy Isoflavone, Genistein Using Microbial Whole Cell Bioconversion. ACS chemical biology. 2017 Nov 17;12(11):2883-2890. Available from, DOI: 10.1021/acschembio.7b00624
Legentil L, Cabezas Y, Tasseau O, Tellier C, Daligault F, Ferrières V. Regioselective Galactofuranosylation for the Synthesis of Disaccharide Patterns Found in Pathogenic Microorganisms. Journal of Organic Chemistry. 2017 Jul 21;82(14):7114-7122. Available from, DOI: 10.1021/acs.joc.7b00565
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Levar CE, Hoffman CL, Dunshee AJ, Toner BM, Bond DR. Redox potential as a master variable controlling pathways of metal reduction by Geobacter sulfurreducens. ISME Journal. 2017 Mar 1;11(3):741-752. Available from, DOI: 10.1038/ismej.2016.146
Lewis M, Prunuske A. The Development of an Indigenous Health Curriculum for Medical Students. Academic Medicine. 2017 May 1;92(5):641-648. Available from, DOI: 10.1097/ACM.0000000000001482
Leydon AR, Weinreb C, Venable E, Reinders A, Ward JM, Johnson MA. The molecular dialog between flowering plant reproductive partners defined by snp-informed rna-sequencing. Plant Cell. 2017 May 1;29(5):984-1006. Available from, DOI: 10.1105/tpc.16.00816
Li X, Michlmayr H, Schweiger W, Malachova A, Shin S, Huang Y et al. A barley UDP-glucosyltransferase inactivates nivalenol and provides Fusarium Head Blight resistance in transgenic wheat. Journal of Experimental Botany. 2017 Jan 1;68(9):2187-2197. Available from, DOI: 10.1093/jxb/erx109
Li C, Du M, Zhou M, Deng L, Li C. Current status and prospects on tomato molecular breeding-from gene cloning to cultivar improvement. Acta Horticulturae Sinica. 2017 Mar 25;44(3):581-600. Available from, DOI: 10.16420/j.issn.0513-353x.2016-0795
Li M, Smith TM, Yang Y, Wilson EJ. Marginal Emission Factors Considering Renewables: A Case Study of the U.S. Midcontinent Independent System Operator (MISO) System. Environmental Science and Technology. 2017 Oct 3;51(19):11215-11223. Available from, DOI: 10.1021/acs.est.7b00034
Lin H, Kazlauskas RJ, Travisano M. Developmental evolution facilitates rapid adaptation. Scientific Reports. 2017 Dec 1;7(1). 15891. Available from, DOI: 10.1038/s41598-017-16229-0
Lind EM, La Pierre KJ, Seabloom EW, Alberti J, Iribarne O, Firn J et al. Increased grassland arthropod production with mammalian herbivory and eutrophication: a test of mediation pathways. Ecology. 2017 Dec 1;98(12):3022-3033. Available from, DOI: 10.1002/ecy.2029
Lippert LG, Dadosh T, Hadden JA, Karnawat V, Diroll BT, Murray CB et al. Angular measurements of the dynein ring reveal a stepping mechanism dependent on a flexible stalk. Proceedings of the National Academy of Sciences of the United States of America. 2017 Jun 6;114(23):E4564-E4573. Available from, DOI: 10.1073/pnas.1620149114
Liška F, Landa V, Zídek V, Mlejnek P, Šilhavý J, Šimáková M et al. Downregulation of Plzf Gene Ameliorates Metabolic and Cardiac Traits in the Spontaneously Hypertensive Rat. Hypertension. 2017 Jun 1;69(6):1084-1091. Available from, DOI: 10.1161/HYPERTENSIONAHA.116.08798
Liu K, Love AC, Travisano M. How cancer spreads: Reconceptualizing a disease. In Boniolo G, Nathan MJ, editors, Philosophy of Molecular Medicine: Foundational Issues in Research and Practice. Taylor and Francis. 2017. p. 100-121. Available from, DOI: 10.4324/9781315674162
Lockhart B, Mollov D, Olszewski N, Goldsmith N. Identification, transmission and genomic characterization of a new member of the family Caulimoviridae causing a flower distortion disease of Rudbeckia hirta. Virus Research. 2017 Sep 15;241:62-67. Available from, DOI: 10.1016/j.virusres.2017.05.012
Lou TF, Weidmann CA, Killingsworth J, Tanaka Hall TM, Goldstrohm AC, Campbell ZT. Integrated analysis of RNA-binding protein complexes using in vitro selection and high-throughput sequencing and sequence specificity landscapes (SEQRS). Methods. 2017 Apr 15;118-119:171-181. Available from, DOI: 10.1016/j.ymeth.2016.10.001
Luca F, Kupfer SS, Knights D, Khoruts A, Blekhman R. Functional Genomics of Host–Microbiome Interactions in Humans. Trends in Genetics. 2018 Jan 1;34(1):30-40. Available from, DOI: 10.1016/j.tig.2017.10.001
Luo P, Yang Y, Wang H, Gu Y, Xu J, Li Y. Water footprint and scenario analysis in the transformation of Chongming into an international eco-island. Resources, Conservation and Recycling. 2018 May 1;132:376-385. Available from, DOI: 10.1016/j.resconrec.2017.07.026
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Lynch J, Tang K, Priya S, Sands J, Sands M, Tang E et al. HOMINID: A framework for identifying associations between host genetic variation and microbiome composition. GigaScience. 2017 Dec 1;6(12):1-7. Available from, DOI: 10.1093/gigascience/gix107
Madlensky L, Trepanier AM, Cragun D, Lerner B, Shannon KM, Zierhut H. A Rapid Systematic Review of Outcomes Studies in Genetic Counseling. Journal of genetic counseling. 2017 Jun 1;26(3):361-378. Available from, DOI: 10.1007/s10897-017-0067-x
Makhijani K, Alexander B, Rao D, Petraki S, Herboso L, Kukar K et al. Regulation of Drosophila hematopoietic sites by Activin-β from active sensory neurons. Nature communications. 2017 Jul 27;8. 15990. Available from, DOI: 10.1038/ncomms15990
Malone KL, Schunn CD, Schuchardt AM. Improving Conceptual Understanding and Representation Skills Through Excel-Based Modeling. Journal of Science Education and Technology. 2018 Feb 1;27(1):30-44. Available from, DOI: 10.1007/s10956-017-9706-0
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Marks CO, Muller-Landau HC, Tilman D. Tree diversity in relation to maximum tree height: evidence for the harshness hypothesis of species diversity gradients. Ecology letters. 2017 Mar 1;20(3):398-399. Available from, DOI: 10.1111/ele.12737
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Michelmore R, Coaker G, Bart R, Beattie G, Bent A, Bruce T et al. Foundational and translational research opportunities to improve plant health. Molecular Plant-Microbe Interactions. 2017 Jul 1;30(7):515-516. Available from, DOI: 10.1094/MPMI-01-17-0010-CR
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Milne RJ, Perroux JM, Rae AL, Reinders A, Ward JM, Offler CE et al. Sucrose transporter localization and function in phloem unloading in developing Stems. Plant physiology. 2017 Feb 1;173(2):1330-1341. Available from, DOI: 10.1104/pp.16.01594
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Monnahan PJ, Kelly JK. The genomic architecture of flowering time varies across space and time in mimulus guttatus. Genetics. 2017 Jul 1;206(3):1621-1635. Available from, DOI: 10.1534/genetics.117.201483
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Neisch AL, Neufeld TP, Hays TS. A STR IPAK complex mediates axonal transport of autophagosomes and dense core vesicles through PP2A regulation. Journal of Cell Biology. 2017 Jan 1;216(2):441-461. Available from, DOI: 10.1083/jcb.201606082
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Nelson PG, May G. Coevolution between mutualists and parasites in symbiotic communities may lead to the evolution of lower virulence. American Naturalist. 2017 Dec 1;190(6):803-817. Available from, DOI: 10.1086/694334
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Nice LM, Steffenson BJ, Blake TK, Horsley RD, Smith KP, Muehlbauer GJ. Mapping agronomic traits in a wild barley advanced backcross–nested association mapping population. Crop Science. 2017 Jan 1;57(3):1199-1210. Available from, DOI: 10.2135/cropsci2016.10.0850
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Nir I, Shohat H, Panizel I, Olszewski N, Aharoni A, Weiss D. The tomato DELLA protein PROCERA acts in guard cells to promote stomatal closure. Plant Cell. 2017 Dec 1;29(12):3186-3197. Available from, DOI: 10.1105/tpc.17.00542
Nolasco EC, Franca-Rocha WDJSD, Moura T, Pinto-Ledezma JN. New range limit of the Anopetia gounellei (Aves: Trochilidae): State of art and a review on the updated area. Papeis Avulsos de Zoologia. 2017 Jan 1;57(21):275-285. Available from, DOI: 10.11606/0031-1049.2017.57.21
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