CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY:...

34
CODE (Committee on Digital Environment) CODE (Committee on Digital Environment) July 26, 2000 July 26, 2000 Rice University Rice University THE NET OF THE 21st CENTURY: THE NET OF THE 21st CENTURY: Concepts across the Interspace Concepts across the Interspace Bruce Schatz CANIS Laboratory Graduate School of Library and Information Science University of Illinois at Urbana-Champaign www.canis.uiuc.edu, [email protected]

Transcript of CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY:...

Page 1: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

CODE (Committee on Digital Environment)CODE (Committee on Digital Environment)July 26, 2000 July 26, 2000 Rice UniversityRice University

THE NET OF THE 21st CENTURY:THE NET OF THE 21st CENTURY: Concepts across the InterspaceConcepts across the Interspace

Bruce SchatzCANIS Laboratory

Graduate School of Library and Information ScienceUniversity of Illinois at Urbana-Champaign

www.canis.uiuc.edu, [email protected]

Page 2: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

THE THIRD WAVE OF NET EVOLUTIONTHE THIRD WAVE OF NET EVOLUTION

PACKETS

OBJECTS

CONCEPTS

Page 3: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

from Objects to Concepts from Syntax to Semantics Infrastructure is Interaction with Abstraction

Internet is packet transmission across computers

Interspace is concept navigation across repositories

CONCEPT SPACESCONCEPT SPACES

Page 4: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

LEVELS OF INDEXESLEVELS OF INDEXES

Technology

Engineering

Electrical

FORMAL

INFORMAL

(manual)

(automatic)

IEEE

communities

groups

individuals

Page 5: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

THE DISTRIBUTED WORLDTHE DISTRIBUTED WORLD

Community Repositories in the Interspace Every Person performs Every Role

USER requestLIBRARIAN referenceINDEXER classifyPUBLISHER qualityAUTHOR generate

Page 6: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

CROSS-OVERS IN SEMANTIC INDEXINGCROSS-OVERS IN SEMANTIC INDEXING

Page 7: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

COMPUTING CONCEPTSCOMPUTING CONCEPTS

1992 1993 1995 1996 1998

‘92: 4,000 (molecular biology)

‘93: 40,000 (molecular biology)

‘95: 400,000 (electrical engineering)

‘96: 4,000,000 (engineering)

‘98: 40,000,000 (medicine)

Page 8: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

SIMULATING A NEW WORLDSIMULATING A NEW WORLD

Obtain discipline-scale collection MEDLINE from NLM, 10M bibliographic abstracts human classification: Medical Subject Headings

Partition discipline into Community Repositories 4 core terms per abstract for MeSH classification 32K nodes with core terms (classification tree)

Community is all abstracts classified by core term 40M abstracts containing 280M concepts concept spaces took 2 days on NCSA Origin 2000

Simulating World of Medical Communities 10K repositories with > 1K abstracts (1K w/ > 10K)

Page 9: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

INTERSPACE NAVIGATIONINTERSPACE NAVIGATION

Semantic Indexes for Community Repositories

Navigating Abstractions within Repository concept space category map

Interactive browsing by Community experts

Page 10: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Interspace Remote Access ClientInterspace Remote Access Client

Page 11: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Navigation in MEDSPACENavigation in MEDSPACE

For a patient with Rheumatoid Arthritis Find a drug that reduces the pain (analgesic) but does not cause stomach (gastrointestinal) bleeding

ChooseDomainChooseDomain

Page 12: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Concept SearchConcept Search

Page 13: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Concept NavigationConcept Navigation

Page 14: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Retrieve DocumentRetrieve Document

Page 15: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Navigate DocumentNavigate Document

Page 16: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Retrieve DocumentRetrieve Document

Page 17: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.
Page 18: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Category MapCategory Map

Page 19: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Category Navigation

Category Navigation

Page 20: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Concept NavigationConcept Navigation

Page 21: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

SWITCHINGSWITCHING

In the Interspace... each Community maintains its own

repository

Switching is navigating Across repositories

use your vocabulary to search another specialty

Page 22: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Medicine SessionMedicine Session

Page 23: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Categories and ConceptsCategories and Concepts

Page 24: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Concept SwitchingConcept Switching

Page 25: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Document RetrievalDocument Retrieval

Page 26: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Support for ScholarshipSupport for Scholarship Analysis (Browsing) Synthesis (Sharing)

Special (Community) Public (Library)

Within (Navigating) Across (Linking)

Page 27: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Community SystemsCommunity Systems

browse and share all the knowledge of a community

data results(database management) (electronic mail)

literature news(information retrieval) (bulletin

boards)

knowledge(hypertext annotations)

Formal Informal

Page 28: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Worm Community SystemWorm Community System WCS Information:Literature BIOSIS, MEDLINE, newsletters,

meetings

Data Genes, Maps, Sequences, strains, cells

WCS FunctionalityBrowsing search, navigationFiltering selection, analysisSharing linking, publishing

WCS: 250 users at 50 labs across Internet (1991)

Page 29: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

WCSMolecular

Page 30: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

WCS Cellular

Page 31: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Rice InterspaceRice Interspace Gather the Information Sources

each (college, class, student) has repository each (department, lab, faculty) has repository

Generate the Community Repositories text documents with articles and annotations specialty datatypes: databases and motifs

Construct the Analysis Environment federated concept switching across sites type-dependent parsing for text/data interlinks

Page 32: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Rice Student TestbedRice Student Testbed

Class by Class Propagation (College by College)

from Special Community Repositories

Similar to Illinois Digital Library Testbed UIUC College of Engineering (Rice scale)

NSF DLI, 1994-98, then University Library

Federated Search using Document Structure Full-text Journals used in classes and labs

Page 33: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

Rice Faculty TestbedRice Faculty Testbed

Department by Department Propagation

from Public Library Repositories

Similar to UIC Medical Center Testbed pilot Surgery residents; plan Medical Center

Concept Spaces for Community Repositories All Medical Literature (MEDLINE, BIOSIS) All Medical Records (Cerner narratives)

Page 34: CODE (Committee on Digital Environment) July 26, 2000 Rice University THE NET OF THE 21st CENTURY: Concepts across the Interspace Bruce Schatz CANIS Laboratory.

THE NET OF THE 21st CENTURYTHE NET OF THE 21st CENTURY

Beyond Objects to Concepts Beyond Search to Analysis Problem Solving via Cross-Correlating

Multimedia Information across the Net

Every community has its own special library Every community does semantic indexing

The Interspace is truetrue Cyberspace