Circulating VDPVs Detected - ocw.u-tokyo.ac.jp · 7m008 No Ab Mock 18h.p.i Neutralizing assay...

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Circulating Circulating VDPVs VDPVs Detected Detected ____________________________________ Country Number of cases Virus type Duration ------------------------------------------------------------------------ Egypt 32 Type 2 19821993 Hispaniola 17 Type 1 20002001 Philippines 3 Type 1 2001 ________________________________________________

Transcript of Circulating VDPVs Detected - ocw.u-tokyo.ac.jp · 7m008 No Ab Mock 18h.p.i Neutralizing assay...

  • Circulating Circulating VDPVsVDPVs DetectedDetected____________________________________Country Number of cases Virus type Duration

    ------------------------------------------------------------------------Egypt 32 Type 2 1982~1993Hispaniola 17 Type 1 2000~2001

    Philippines 3 Type 1 2001________________________________________________

  • LongLong--term Carriersterm Carriers

  • Developed CountriesDeveloped Countries

    OPV IPV no polio virusno immunization

  • Many Developing CountriesMany Developing Countries

    OPV no immunization

    Low cost anti-PV drugsNew OPV with high genetic stability

  • RATE OF MUTATIONRATE OF MUTATION

    Replication of ssRNA genomes ---- 10-3 ~ 10-4

    Replication of dsDNA genomes---- 10-8 ~ 10-11

    Holland et al. (1982) Science 215:1577

  • Supporting a SequenceSupporting a Sequence--loop Modelloop Model

  • Supporting a SequenceSupporting a Sequence--loop Modelloop ModelGeneration of DI particles

    ST-RNA+

    or

    DI-RNA

    ST-RNA: RNA of Standard virusDI-RNA: RNA of DI particle

    :VPg : polyA : polyU

    Generation of recombinants

    +A(+)

    A(–)+orB(+) B(–)

    A(+): + Strand of strain A A(–): ー Strand of strain AB(+): + Strand of strain BB(–): ー Strand of strain B

  • polio virus

    World power relationships of World power relationships of enterovirusesenteroviruses

    Modern world After polio virus eradication

    echovirus coxsackievirus

    other viruses

    echovirus coxsackievirus

    other viruses

    evolution of viruses (invasion)

  • Pathogenic microbesPathogenic microbes

    Effective microbesEffective microbes

    Other microbesOther microbes

  • digestive tract

    Replication of polio virus and disseminationReplication of polio virus and disseminationOral infection

    barrier (tonsils, Peyer’s patch)

    blood stream

    barrier(BBB)

    central nervous system

    motor nerve cell

    Skeletal muscle

    axon pathway

  • Schematic Structure of Polio Virus Vector Schematic Structure of Polio Virus Vector for Expression of BDNFfor Expression of BDNF

    .. BDNF..M R G R ... … E L G G G G E A L F Q G

    Artificial 3Cpro trans-cleavage siteSac INot I

    GAG CTC GGA GGA GGA GGA GAG GCT TTG TTT CAA GGT GCTAUA ATG CGC GGC CGC

    VP3 VP1 2A 2B 2C 3A 3C 3D5' 3'VP0VPg

  • P3P1 P2

    -1.8 kb

    -2.6 kb

    5'

    VP3 VP1 2A 2C 3A 3C 3D

    VP4VPg

    non-structural domainstructural domain

    OMΔ0.8

    PV1(M)OM

    OMΔ1.8

    OMΔP1

    OMΔP1Δ2A

    -0.8 kb

    -3.1 kb

    Non-translated domain

    RNA structure of PVRNA structure of PV--deficient mutantdeficient mutant

    poly A3B

    Non-translated domain

    2B

    3'

    VP2

  • PV RNA replication activity measuring methodPV RNA replication activity measuring method

    in vitro synthesized RNA from defective mutant cDNA

    HeLa monolayer cultured cell in 6 well plate

    RNA extraction 2hrs/8hrs after transfection

    RNA transfection by DEAE-dextran method

    The probe is cDNA in a 5’ non-translated regiondetection of PV RNA by slot blot method

  • non-structure domainstructure domain

    P1 P2

    -1.8 kb

    -2.6 kb

    5'

    -0.8 kb

    -3.1 kb

    2C 3A

    VP4

    3'VP3VP1 2AVP2VPg

    3D

    OMΔ0.8

    PV1(M)OM

    OMΔ1.8

    OMΔP1

    OMΔP1Δ2A

    mock

    inner standard GAPDH

    ++

    ++

    +++

    RNA replicationactivity

    2 h 8 h 2 h 8 h

    2B 3C 3D

    P33B

    RNA structure of PVRNA structure of PV--deficient mutant deficient mutant

  • VV-P1

    RNA packaging of RNA packaging of PVPV--deficient mutantdeficient mutant

    amplification of DI particles containing PV- defective mutant RNA

    in vitro synthesized PV-defective mutant RNAHeLa monolayer cultured cell

    formation of DI particle containing PV-defective mutant RNA

    passage of DI particleVV-P1

    Passage1

    Passage2

    Mock

    removal VV-P1 by SDS treatment

  • OMΔ0.8

    PV1(M)OM

    OMΔ1.8

    OMΔP1

    OMΔP1Δ2A

    mock

    inner standard GAPD

    2 h 8 h

    2 h 8 h

    RNA replication activities of packaged PVRNA replication activities of packaged PV--defective defective mutant mutant RNAsRNAs

    particle formationactivity

    Non-structure domainStructure domain

    P1 P2

    -1.8 kb

    -2.6 kb

    5'

    -0.8 kb

    -3.1 kb

    2C 3A

    VP4

    3'VP3VP1 2AVP2VPg 2B 3C 3D

    P33B

  • Function of 2A proteaseFunction of 2A protease

    ・inhibition of cap-dependent translation

    ・cytopathic effect ; CPE

    2A

    Virus RNA replication

    ・not necessary, but some involvement in RNA replication

    ・enhance translation-starting efficiency

    Effects to infected cell

  • CPE expressions in CPE expressions in DI DI particle infected cellsparticle infected cells

    mock

    OMΔ0.8 OMΔ1.8

    OMΔP1 OMΔP1Δ2A

    PV1(M)OM

  • EMCV IRES

    P3P1 P2

    VP3 VP1 2A 2C 3A 3C 3D

    VP4pPV1(M)OM

    3B

    2BVP2

    pPVE2A

    pPVE2B

    PV

    IRES

    3Cpro cleavage site

    2B

    Expression vector:pSVA14

    poly A

    PV

    IRES2A

    2Apro cleavage site

    PV

    IRES

    EMCV IRES

  • PVE2APV1(M)OM

    Mock PVE2B

    (8 hours post infection (h.p.i))

    CPE

    CPE

    CPE

    NO CPE

  • PVE2APV1(M)OM PVE2B

    7m008

    No Ab

    Mock

    18h.p.i

    Neutralizing assay producing virusesNeutralizing assay producing virusesby I antibodyby I antibody

  • Polio research in a post genome eraPolio research in a post genome erastructure of whole genome conformation of particles

    infectious nucleic acid polio virus receptor

    reverse genetics polio-sensitive transgenic mouse

    IRES activity and virus tropism receptor and virus tropism(tissue-specificity) (species-specific)

    Mechanisms of polio virus replicationand pathogenicity expression in

    the body

    Circulating VDPVs Detected�____________________________________�Country Number of cases Virus type Duration�--Long-term CarriersDeveloped CountriesMany Developing CountriesSchematic Structure of Polio Virus Vector for Expression of BDNFNeutralizing assay producing viruses� by I antibodyPolio research in a post genome era