ChemiDoc XRS+ With Image Lab

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  • 8/14/2019 ChemiDoc XRS+ With Image Lab

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    Imaging

    Effortless and Accurate Imaging

    and Analysis for Gels and Blots

    Molecular ImagerChemiDocXRS+Systems

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    Solve Complex Biological Questionswith Simple and Reliable Imaging

    For more than two decades, Molecular Imager systems

    rom Bio-Rad have been widely recognized and trusted

    high-quality imaging instruments. Whether your research

    includes routine imaging o chemiluminescent western

    blots rom cell lysates or puriied proteins or SDS-PAGE

    or PCR products or diagnostics or therapeutic

    development the ChemiDoc XRS+ imaging system will

    meet your needs. Designed or ease o use and ability to

    support a wide array o applications, it is a perect it or

    individual laboratories or multiuser core acilities.

    Quality standards o engineering and manuacturing

    make the system adaptable to academic or

    biopharmaceutical laboratories. Thousands oresearchers over the years have published images

    acquired with the ChemiDoc XRS system in journal

    articles and grant proposals and established a record o

    reliability and excellence or the system.

    The Molecular Imager ChemiDoc XRS+ system enables

    direct digital visualization o chemiluminescent western

    blots or accurate images o accumulated signal rom

    the chemiluminescent reaction. It provides reliable

    quantitative data or characterizing your samples

    reproducibly.

    The ChemiDoc XRS+ system is lexible and easy to

    use and supports other detection methods includingluorescence and colorimetry. It is the ideal complement

    to your electrophoresis, puriication, and PCR systems,

    enabling image analysis and documentation o western

    blots, protein and DNA gels, and other sample types.

    What the ChemiDoc XRS+ System

    Can Do for You:

    Automated workflow from image to results

    n Makes your blot and gel imaging and analysis quick

    and eortless

    n Eliminates the need or training

    n Allows any user to repeat the same worklow in

    exactly the same way

    Automated image capture

    n Produces beautiul pictures o your blots and gels

    n Delivers quantitative analysis o your protein and

    DNA samplesAutomated image optimization

    n Delivers image data that is always optimized

    and reproducible without imaging artiacts

    n Eliminates the need to use costly and

    undependable X-ray ilm techniques

    Automated image analysis

    n Produces reports with data organized

    the way you want

    n Minimizes time rom lab work

    to presentations

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    Immun-StarWestern

    chemiluminescent dete

    SYBR Safe stain

    Coomassie Brilliant BR-250 stain

    Oriole stain

    Qdot blot

    ChemiDoc XRS+ System Applications

    Nucleic Acid Protein Gel

    Electrophoresis Electrophoresis Blotting

    Ethidium bromide Coomassie Blue Chemiluminescent

    SYBR Green Copper stain Colorimetric

    SYBR Sae Zinc stain Qdots 525

    SYBR Gold Flamingo uorescent gel stain Qdots 565

    GelGreen Oriole stain Qdots 625

    GelRed Silver stain CY2

    Fast Blast DNA stain Coomassie Fluor Orange Alexa Fluor 488

    SYPRO Ruby DyLight 488

    Krypton Fluorescein

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    Fast Results from a Completely

    Automated Workflow

    The ChemiDoc XRS+ system is controlled by Image Lab

    sotware to automatically and reproducibly generate blot

    and gel images. Image Lab sotware is ast, taking you

    rom blot to printed results in seconds. Your results are

    visible with a single click o the computer mouse.

    Image Lab sotware eliminates the guesswork in imaging.

    You wont have to perorm tedious repetitive steps to ind

    the right ocus setting. You wont have to guess which

    exposure times will best visualize the bands o interest.

    Image calculations and corrections are done automatically

    or your application. Whether you are working with protein

    gels, nucleic acid gels, blots, or your own customized

    imaging application, the ChemiDoc XRS+ system will select

    the proper settings or optimum detection conditions o the

    stain, label, or light-emitting substrate in use.

    You wont need to set aside time or training new users;

    the system and the sotware are easy to use and work

    together rom setup to inish. Imaging and image analysis

    can become the simplest work in the laboratory.

    ChemiDoc XRS+ System Is Poweredwith Image LabSotware

    Simple and Reproducible Image Capture

    Place your gel or blot on the ChemiDoc imagers sample tray

    and run your protocol: Your work is done in just one step.

    Design and save protocols or the imaging steps in your

    experiments, and Image Lab sotware will run the protocols

    exactly the same way every time. The protocol eature negatvariability in results due to dierent people operating the

    imaging system. When a new project is related to an existing

    one, you can reuse the previously created protocol by revisin

    its parameters and renaming it. Image Lab sotware lets you

    devote your valuable time to research and discovery instead

    to wondering i you used your imaging system properly.

    Lane proles depict band intensity and represent quantities o sample

    components separated in a gel.

    Automated workfow or any application.

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    Results and ReportsIn addition to printing a picture o your gel or blot or your

    records, Image Lab sotware creates and prints reports o

    your experimental data. Any part o the report can be copied

    into popular document processing applications such as

    Adobe Acrobat and Microsot Word, PowerPoint, or Excel

    iles. To include a 3-D view o your gel or blot, copy it using

    the Snapshot tool, and paste it into your presentation slide.

    High quality, good-looking reports are easy to produce with

    the combined power o the ChemiDoc XRS+ system and

    Image Lab sotware.

    When an analysis parameter is changed, the results tables

    are updated instantly to relect the new data.

    Tutorials

    With Image Lab sotware, you dont need previous imaging

    experience to produce optimal gel and blot images. Detailed

    tutorials are accessible via the toolbar and start-up page to

    acquaint you with all o the Image Lab sotware capabilities.

    Three Unique Features

    The power o Image Lab sotware stems rom

    three eatures:

    n

    Image Lab sotwares proprietary algorithms (patentpending) calibrate the system at setup or automatic

    control o ocus at any zoom level and automatic

    correction o imaging artiacts

    n Image Lab sotware perorms lat ielding corrections

    speciically and consistently or each application

    n Image Lab sotware saves the entire worklow (image capture,

    results, report) in a protocol ile. The protocols can be edited,

    resaved, reused, and shared among multiple users

    Tutorials or novice users.

    Its that easy to use Image Lab to generate the data andreports that you need. Please look at the other tutorials ormore detailed explanations o other Image Lab eatures.

    Immunodetection

    Chemiluminescent Detection

    Use the signal accumulation mode (SAM) o the

    ChemiDoc XRS+ system to record the time course o

    development o the chemiluminescent reaction.

    n Eliminate the guesswork oten involved with single-

    event ilm capture o blot signals

    n Simpliy chemiluminescent digital imaging

    During the live acquisition, the ChemiDoc XRS+

    system records progressive image development, allowi

    users to:

    n Visualize the accumulated chemiluminescent signal at

    multiple time points and capture the image

    n Customize acquisition time and the number o

    images taken

    n Save and analyze each image while the next image is

    being captured, even beore the series is complete

    Automatic digital capture o chemiluminescent blot signal

    eicient.

    n Eliminate the chemical use and disposal problems

    involved with ilm developing

    n The sel-contained lighttight enclosure means you dont

    need a separate darkroom

    For a more detailed comparison o digital detection with t

    ChemiDoc XRS+ system and analog detection with ilm,

    reer to bulletin 5809.

    Comparison o chemiluminescent western blot detection on X-ray lm

    and with the ChemiDoc XRS+ system. Blots o twoold serial dilutions

    o human serum were probed with rabbit anti-human transerrin polyclonal

    antibodies. A 1/1,000 dilution o human serum was used to make the twoo

    serial dilutions. A 300 sec exposure on flm does not reach the same limit o

    detection that is reached by a 60 sec exposure in the ChemiDoc XRS+ sys

    X-ray lm (300 sec exposure)

    ChemiDoc XRS+ system (60 sec exposure)

    Human serum volume, pL

    500 250 125 62.5 31.25 15.62 7.81 3.9 1.95

    Chemiluminescence,

    RU

    Limit o Detection o Film and ChemiDoc XRS+ System

    300,000

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    X-ray flm

    ChemiDoc XRS+ syst

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    Quantitative dynamic range and visualization tools.A, the ChemiDoc XRS+

    system detects a wide range o sample concentrations without saturating the

    most concentrated band, enabling linear quantitation. A variety o visualization

    tools are provided or sample verifcation. B, the 3-D viewer shows the distinct

    peaks o the most concentrated band as well as the aintest band. C, the lane

    profles provide quick comparison o expression levels rom each lane. D, the

    volume regression curve shows a correlation coefcient R2 o 0.986909

    confrming linear data over the entire range o sample detection.

    A C

    B D

    Chemiluminescent ELISA arrays.The

    Quansys Biosciences Q-Plex array has16 distinct capture antibodies bound to

    each well o a 96-well plate. The attributes

    o high resolution and sensitivity enable

    the ChemiDoc XRS+ system to image the

    entire plate (panelA)while resolving each

    array spot (panel B) with the dynamic

    range (panel C) to provide quantitative

    data (panel D).

    A B

    C

    D

    Accurate Quantitation Visualized

    The ChemiDoc XRS+ system can perorm accurate

    quantitative detection with high resolution and sensitivit y

    on a wide variety o samples.

    Chemiluminescent sample detection and visible markers.Visible markers

    are commonly used to monitor problems with SDS-PAGE and blot transer. To

    determine the molecular weights, users trace the pattern o the visible marker

    rom the blot to flm. This adds additional steps and can possibly introduce

    errors. The ChemiDoc XRS+ system images the chemiluminescent samples

    and visible markers to provide a digital record; the images are then merged or

    molecular weight estimation.

    Chemiluminescence

    Chemiluminescence image rom

    sample merged with visible marker

    Chemiluminescent and Colorimetric Detection

    Combined in a Single Blot

    Multifuorescent western blot detection o maltose binding protein

    (MBP) and Pronity eXact usion-tagged MBP bands using Qdot 625

    and Qdot 525 fuorescent conjugated secondary antibodies (Invitrogen

    Corp.), respectively, imaged with the ChemiDoc XRS+ system.The

    blot was imaged with excitation via UV, and separate images were taken by

    switching between 520/30 (Qdot 525) and 630/30 (Qdot 625) flters installedin the ChemiDoc XRS+ imager. Multiuorescent western blotting enables

    detection o two antibody-specifc proteins at once, removing the variability

    involved with two blots or the loss o protein with stripping. For more

    inormation, reer to bulletin 5792.

    1,5

    00

    750 370 200

    100 40 30 15 6.0 3.0 1.5

    Multifluorescent Western Blot

    Visible marker

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    Veriication and Quantitative Analysis

    Molecular Biology

    Gel electrophoresis remains an important tool or

    quantitative analysis o complex protein and nucleic acid

    samples. Applications include nucleic acid isolation or

    ampliication or molecular cloning techniques, nucleic

    acid quality evaluation prior to quantitative PCR, gene

    silencing, gene modulation, and gene expression.

    ChemiDoc XRS+ systems are suitable or laboratories

    engaged in RNAi analysis, molecular diagnostics,

    epigenetics, pharmacogenomics, and orensic testing o

    genomic DNA.

    Protein gels stained with Coomassie Blue stain (let) and silver stain

    (right). Documentation o protein gels or lab notebooks or sample analysis,

    including protein purity and concentration assessment or dierential protein

    expression studies or to monitor gene modulation products, is suppor ted by

    the array o analysis tools in the ChemiDoc XRS+ system. The gel stained

    with silver stain shows salmon muscle, soybean, and rat brain extracts,

    protein mixtures, and E. coliextracts compared with Precision Plus Protein

    unstained standards.

    Protein gels fuorescence-stained with Oriole stain (let) and Flamingo

    fuorescent gel stain (right).Achieve higher levels o sensitivity with

    uorescent stains to dierentiate proteins with low expression. Resolve

    closely spaced spots or bands or protein profling, quantitation, and

    characterization.

    Protein Analysis

    ChemiDoc XRS+ systems are oten incorporated into

    sample preparation and sample quantitation worklows.

    An alternative to UV illumination to better preserve DNA samples.

    Top, serial dilutions o EtBr-stained precision molecular mass ruler

    (Bio-Rad Laboratories, Inc.) on agarose gel imaged with UV light; bottom,

    serially diluted precision molecular mass ruler stained with SYBR Sae

    stain on agarose gel imaged with XcitaBlueconversion screen.There

    is no loss in sensitivity when a combination o SYBR Sae nucleic acid

    uorescent stain and less harmul blue excitation is used instead o UV-

    excitable EtBr. The image o the gel s tained with SYBR Sae stain was

    taken using the XcitaBlue conversion screen and a flter or SYBR Sae

    stain and GFP. Less harmul detection methods better preserve samples

    or downstream uses such as cloning.

    Ethidium Bromide and SYBR Safe DNA Stain Detection

    Fluorescence,

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    Sample load, ng

    51.2 25.6 12.8 6.4 3.2 1.62 0.8 0.4 0.2 0.1

    SYBR Sae andXcitaBlue conversion

    screen

    EtBr and UV light

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    Life ScienceGroup

    09-0690 1009 Sig 0308Bulletin 5837 Rev B US/EG

    Bio-RadLaboratories, Inc.

    Web site www.bio-rad.com USA 800 4BIORAD Australia 61 02 9914 2800 Austria 01 877 89 01 Belgium 09 385 55 11 Brazil55 21 3237 9400Canada 905 364 3435 China 86 21 6426 0808 Czech Republic420 241 430 532 Denmark44 52 10 00 Finland09 804 22 00 France 01 47 95 69 65Germany089 318 84 0 Greece 30 210 777 4396 Hong Kong 852 2789 3300 Hungary36 1 455 8800 India 91 124 4029300 Israel03 963 6050Italy39 02 216091 Japan 03 6361 7000 Korea 82 2 3473 4460 Mexico 52 555 488 7670 The Netherlands 0318 540666 New Zealand0508 805 500Norway23 38 41 30 Poland48 22 331 99 99 Portugal351 21 472 7700 Russia 7 495 721 14 04 Singapore 65 6415 3188 South Africa 27 861 246 723Spain 34 91 590 5200 Sweden 08 555 12700 Switzerland061 717 95 55 Taiwan 886 2 2578 7189 United Kingdom 020 8328 2000

    Specifications

    Automation Capabilities

    Workow automated selection Application driven; user selected or recalled by a protocol

    Workow automated execution Controlled by a protocol via application specifc setup or image area, illumination source, flter,

    analysis, and reporting

    Workow reproducibili ty 100% repeatabil ity via recallable protocols; rom image capture to quantitative analysis and reports

    Autoocus (patent pending) Precalibrated ocus or any zoom setting or sample height

    Image at felding* Dynamic; precalibrated and optimized or every application

    Autoexposure 2 user-defned modes (intense or aint bands)

    Hardware Specications

    Maximum sample size 28 x 36 cm

    Maximum image area 25 x 26 cm

    Excitation source Trans-UV and epi-white are standard (302 nm included, with 254 nm and 365 nm available as options);

    optional trans white, sel-powered or conversion screen; optional XcitaBlue UV/blue conversion screen

    Illumination control 5 modes (trans-UV, epi-white, and no illumination or chemiluminescence are standard); trans white

    and XcitaBlue conversion screens are options

    Detector Supercooled CCD

    CCD resolution (H x V) 1,392 x 1,040 pixels

    Pixel size (H x V) 6.45 x 6.45 m

    Cooling system Peltier

    Camera cooling temperature 30C controlled

    Filter selector 3 positions (2 or flters, 1 without flter, or chemiluminescence)

    Emission flters 1 included (standard), 3 optional

    Dynamic range >4.0 orders o magnitude

    Pixel density (gray levels) 65,535Instrument size (L x W x H) 36 x 60 x 96 cm

    Instrument weight 32 kg

    Operating Ranges

    Operating voltage 110/115/230 V AC nominal

    Operating temperature 1028C (21C recommended)

    Operating humidity