Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting...

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Checkpoint 1 Corey Harada

Transcript of Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting...

Page 1: Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting SNP data from a file. –Can accept simple queries. Return.

Checkpoint 1

Corey Harada

Page 2: Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting SNP data from a file. –Can accept simple queries. Return.

What has been implemented

• Webserver– Implemented a method of inputting SNP data

from a file.– Can accept simple queries.

• Return SNPs located on a specific chromosome and / or in a specific location.

Page 3: Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting SNP data from a file. –Can accept simple queries. Return.

What has been investigated

• Investigated several Rubygems, add-ons that we can use in our webserver.– Add on to help in visualization, so that the

webserver will be able to display the results of our tests.

• Looked into the statistical models necessary to associate SNPs with phenotypes.

Page 4: Checkpoint 1 Corey Harada. What has been implemented Webserver –Implemented a method of inputting SNP data from a file. –Can accept simple queries. Return.

What has been investigated and Revision of Goals

• Looked into use of AJAX to create a dynamic Java back-end for the server.

• We have no major revision of goals.