Chapter 7 –BiomembraneStructure · 2017-04-09 · Chapter 7 –BiomembraneStructure 7.1 The Lipid...
Transcript of Chapter 7 –BiomembraneStructure · 2017-04-09 · Chapter 7 –BiomembraneStructure 7.1 The Lipid...
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Chapter7– Biomembrane Structure
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Whatwillyoulearn?
Biomembranestructure
Transmembranetrasportofionsandsmallmolecules
Movingproteinsintomembranesandorganelles
Vesiculartraffic,secretionandendocytosis
SignaltransductionandGprotein-coupledreceptors1
SignaltransductionandGprotein-coupledreceptors2
Signalingpathwaysthatcontrolgeneactivity
Eukaryoticcellcycle
CancerandImmunoolgy
Cellularsignaling…
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Chapter7– Biomembrane Structure
7.1TheLipidBilayer:CompositionandStructuralOrganization7.2MembraneProteins:StructureandBasicFunctions7.3Phospholipids,Sphingolipids,andCholesterol:SynthesisandIntracellularMovement
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7.1TheLipidBilayer:CompositionandStructuralOrganization• Membranes̶barriersbetweenaqueouscompartments• Amphipathicphospholipidsspontaneouslyformbilayerswithhydrophilicfacesandahydrophobiccore.
• Biologicalmembranes– varyinlipidcomposition– impermeabletowater-solublemoleculesandions– haveaviscousconsistencywithfluid-likeproperties
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Plasmamembrane?What’stheroleofplasmamembrane?
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Fluidmosaicmodelofbiomembranes
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Membraneandmembraneproteinlikethis…
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Fluidmosaicmodelofbiomembranes
• Membrane:phospholipidbilayer– 2Dfluid• Fluidity:(similartothatofoliveoil)
• Integralmembraneproteins(transmembraneproteins)spanthebilayerandoftenformdimersandhigher-orderoligomers.
• Lipid-anchoredproteins– tetheredtooneleafletbyacovalentlyattachedhydrocarbonchain• Peripheralproteins– associateprimarilybyspecificnoncovalentinteractionswithintegralmembraneproteinsormembranelipids[includecytoskeletalproteins]
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Fluidmosaicmodel
https://www.youtube.com/watch?v=Qqsf_UJcfBc
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Eukaryoticcellularmembranesaredynamic structures.
• (a)HIV-infectedcellplasmamembrane:• Viruscore– envelopedbyregionofcellplasmamembranethatcontainsspecificviralproteins• HIVparticles– budfromplasmamembrane
• (b)StackedmembranesoftheGolgicomplexwithbuddingvesiclesinvolvedinintracellulartrafficking
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Thebilayerstructureofbiomembranes.
•Membranephospholipids:• Amphipathicmolecules–endshavedifferentchemicalproperties:• Hydrophobic (“waterfearing”)fattyacid-based(fattyacyl)hydrocarbon“tail”– partitionsawayfromwater• Hydrophilic (“waterloving”)polar“headgroup”– interactswithwatermolecules
Howtoextractthephospholipid?
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Formationandstudyofpurephospholipidbilayers.
• Isolationandreconstitutionofmembranebilayers:• (Top):Membranetreatmentwithanorganicsolvent(3:1mixtureofchloroformandmethanol)selectivelysolubilizesthephospholipidsandcholesterol.(Proteinsandcarbohydratesremaininaninsolubleresidue.)• Solventremovedbyevaporation.• (Bottomleft):Mechanicaldispersalofextractinwater– lipidsspontaneouslyformliposomes• (Bottomright):Planarbilayerformationoverasmallholeinapartitionseparatingtwoaqueousphases– canbeusedtostudythephysicalpropertiesofbilayers,suchastheirpermeabilitytosolutes.
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Thefacesofcellularmembranes
Whereisthemembrane?Function?Dynamics?
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Thefacesofcellularmembranesareconservedduringmembranebuddingandfusion
Thenhowtoinserttheproteinintheplasmamembrane?
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Variationinbiomembranes indifferentcelltypes
• (a)Erythrocytecell:• Discoid– flexibleshaperequiredforsqueezingthroughbloodcapillarieswithsmallerdiameters• Shapedefectscausecelllysis– anemias
• (b)Ciliummembrane(Ependymalcellsliningbrainventricles):• Regionofplasmamembranethatprojectsfromcell• Flexibilityenablesciliarymotility
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Question
• Membranedynamics?• Howtomakethedifferentcellmembranes?
• Protein-membranetrafficking• Cellmovement• Membrane-supportingproteins(structuralproteins)
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Basicstructureandproperty
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Threeclassesofmembranelipids• (a)Phosphoglycerides (mostabundant):
• Glycerol backbone.• Tails– twoesterifiedhydrophobicfattyacylchains
• varyinlength(commonly16or18C)• varyinsaturation– saturated(nodouble
bonds)orunsaturated(one,two,orthreedoublebonds)
• Head– apolargroupesterifiedtothephosphate• 4majorheadgroups– phosphatidylcholine
(PC),phosphatidylethanolamine(PE),phosphatidylserine(PS),andphosphatidylinositol(PI).
• (Plasmalogens – onefattyacylchainattachedtoglycerolbyanesterlinkageandoneattachedbyanetherlinkageandthesameheadgroupsasotherphosphoglycerides)
• (b)Sphingolipids:• Derivativesofsphingosine(anaminoalcoholwitha
longhydrocarbonchain)• Variousfattyacylchainsconnectedbyanamidebond• Sphingomyelins(SM)– containaphosphocholine head
group• Somesphingolipidsareglycolipidsthatcontaina
singlesugarresidueorbranchedoligosaccharideattachedtothesphingosinebackbone.Glucosylcerebroside (GlcCer)hasaglucoseheadgroup.
• (c)Sterols:• Membranecomponents– animals(cholesterol),fungi
(ergosterol),andplants(stigmasterol)• Amphipathicstructure:
• headgroup– singlepolarhydroxyl• tail– conjugatedfour-ringhydrocarbon and
shorthydrocarbonchain
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• Phospholipidswithlongsaturatedfattyacylchainsassembleintoahighlyordered,gel-likebilayerthatmaximizeshydrophobicinteractionsbetweentails.• Heat– disordersnonpolartails– inducesatransitionfromageltoafluidwithinatemperaturerangeofonlyafewdegrees(phasetransitiontemperature).• Chaindisorderdecreasesbilayerthickness.
• Mostlipidsandmanyproteinsarelaterallymobile inbiomembranes.• Lipidmoleculemovementinmembrane:• Exchangesplaceswithneighborsinaleaflet~107times/sec.
Howtoshowtheinterchange?
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Fluorescencerecoveryafterphotobleaching(FRAP)experimentscanquantifythelateralmovementofproteinsandlipidswithintheplasmamembrane
• Step1:Labelcellswithafluorescentreagentthatbindsuniformlytoaspecificmembranelipidorprotein.
• Step2:Irreversiblybleachwithlaserlightfluorescenceinasmallareaofthecellsurface.• Step3:Measurefluorescencerecoveryinthespotovertime.
• Fluorescenceofthebleachedpatchincreasesasbleachedfluorescentlipids/proteindiffusein(fluorescencerecovery)andbleachedonesdiffuseout.
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MajorLipidComponentsofSelectedBiomembranes
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Effectoflipidcompositiononbilayerthicknessandcurvature.
• (a)Puresphingomyelin(SM)bilayer:• Thickerthanphosphoglyceride(phosphatidylcholine)bilayer
• Cholesterollipid-orderingeffectincreasesphosphoglyceride bilayerthickness. [Lipidraftsarethickerthanothermembraneregions.]
• (b)Phospholipids:• PCcylindricalshape– formsessentiallyflatmonolayers
• PEconicalshape(smallerheadgroup)–formscurvedmonolayers
• (c)BilayerenrichedwithPCintheexoplasmicleafletandwithPEinthecytosolicface(asinmanyplasmamembranes)– naturalcurvature
• Severalproteinscancurveamembranebybindingtoaphospholipidbilayersurface–importantinformationoftransportvesiclesthatbudfromadonormembrane.
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Cholesteroleffect
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Sphingomyelin• Sphingomyelin (SPH,ˌsfɪŋɡoˈmaɪəlɪn)isatype
of sphingolipid foundinanimal cellmembranes,especiallyinthemembranous myelinsheath thatsurroundssome nervecell axons.
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Effectoflipidcompositiononbilayerthicknessandcurvature.
• (a)Puresphingomyelin(SM)bilayer:• Thickerthanphosphoglyceride(phosphatidylcholine)bilayer
• Cholesterollipid-orderingeffectincreasesphosphoglyceride bilayerthickness. [Lipidraftsarethickerthanothermembraneregions.]
• (b)Phospholipids:• PCcylindricalshape– formsessentiallyflatmonolayers
• PEconicalshape(smallerheadgroup)– formscurvedmonolayers
• (c)BilayerenrichedwithPCintheexoplasmicleafletandwithPEinthecytosolicface(asinmanyplasmamembranes)– naturalcurvature
• Severalproteinscancurveamembranebybindingtoaphospholipidbilayersurface–importantinformationoftransportvesiclesthatbudfromadonormembrane.
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Iftoomuchcholesterolinthecellmembrane…
• Whatshouldthecellsdo?
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LipiddropletsformbybuddingandscissionfromtheERmembrane.
• Cellsstoreexcesslipidsinlipiddroplets:• Storagecompartmentsfortriglyceridesandcholesterolesters– alsomayserveasplatformsforstorageofproteinstargetedfordegradation.
• Lipiddropletformation:• Cholesterolestersandtriglyceridesaccumulatewithinthehydrophobiccoreofthelipidbilayer.• Delaminationofthetwolipidmonolayersformsa“lens.”• Lensgrowthcreatesasphericaldroplet– releasedbyscissionattheneck.• ThenewlyformeddropletissurroundedbyalipidmonolayerderivedfromthecytosolicleafletoftheERmembrane.
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7.2MembraneProteins:StructureandBasicFunctions• Biologicalmembranescontainintegral,lipid-anchored,andperipheralproteins.
• Integralmembraneproteinscontainoneormorehydrophobicmembrane-spanningdomains.
• Transmembraneproteinsandglycolipidsareasymmetricallyorientedinthebilayer.
• Non-ionicdetergentsselectivelyextracttransmembraneproteins.
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Integralproteins
• Whatmeanstheintegral?
Thenwhichkindofaminoacids?
Ifithasalpha-helixstructure,whatkindofRgroup?
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StructureofglycophorinA,atypicalsingle-passtransmembraneprotein.
• Single(23-residue)membrane-spanningαhelix• composedofaminoacidswithhydrophobic(uncharged)sidechains• αhelixtypically20–25aminoacidslongintransmembraneproteins
Thenthinkaboutthefluid-mosaicmodel
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Chargedresiduescanorchestratetheassemblyofmultimericmembraneproteins.
• Tcellreceptor(TCR)forantigen– composedoffourseparatedimers:• αβpairdirectlyresponsibleforantigenrecognition• CD3complexaccessorysubunits– γ,δ,ε,andζsubunits• Electrostaticattractionofpositiveandnegativechargesoneachtransmembranedomainformsthecompletecomplex.
Inthefluid-mosaicmembrane!
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Lipidanchoredproteins
• Anchor?
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Anchoringofplasma-membraneproteinstothephospholipidbilayerbycovalentlylinkedhydrocarbongroups.
(a)Acylation
• (b)Prenylation:
(c)GPI(glycosylphosphatidylinositol)lipidanchor
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Glycolipid:anchoredtothelipidHumanABObloodgroupantigens
• Threestructurallyrelatedoligosaccharidescomponentsofcertainglycoproteinsandglycolipids– onthesurfaceofhumanerythrocytes(RBCs)andothercelltypes
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DetergentWhenwillyouusethedetergent?
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• Chemicalnature:• Non-ionic– donotdenatureproteins;usefulforsolubilizingintegralmembraneproteins• Ionicdetergents– chargedisruptsionicandhydrogenbondstodenaturemostproteins
• Solubility:• Lowconcentrations– detergentsdissolveinwaterasisolatedmolecules• Higherconcentration– detergentsformmicelles
Structuresoffourcommondetergents.
Whenwillyouusethedetergent?
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• Criticalmicelleconcentration(CMC):
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7.3Phospholipids,Sphingolipids,andCholesterol:SynthesisandIntracellularMovement• Cellssynthesizenewmembranesbytheexpansionofexistingmembranes.
• Membranelipidscontainsaturated/unsaturatedfattyacidsofvariouschainlengths.
• FattyacidsaresynthesizedinERandmovedtotheotherleafletbyflippases andtoothermembranesbymultiplemechanisms.
• HMG-CoAreductasecatalyzesthecholesterolbiosynthesisrate-controllingstep.
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PhospholipidsynthesisintheERmembrane
Membrane-associatedenzymescatalyzethelaststepsofphospholipidsynthesis attheinterfacebetweenamembrane(smoothER) andthecytosol
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Cholesterolbiosyntheticpathway
CholesterolissynthesizedbyenzymesinthecytosolandERmembrane(mainlyinlivercells)
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Proposedmechanismsoftransportofcholesterolandphospholipidsbetweenmembranes.
Canyouexplainthesemodels???
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Discussionwithfriends• Forimmunohistochemistrythemembraneshouldbe
permeabilizedbuttheconformationofproteinshouldbeintact.Whichkindofdetergentisthebestfortheimmunohistochemistryandhowconcentrationisit?
• Findeachexampleproteinthatattachestotheplasmamembranebyprenylation,acylationandGPI.
• FindthegeneralstructureandfunctionofHIVenvelopeglycoprotein.
• Read the ‘aboutcover’andexplainit.
https://www.nature.com/nature/journal/v545/n7653/index.html