Case Study - Math - The University of Utahfiras/1070/Chapter_23.pdf · TABLE 23.1 BPS - 5th Ed....

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Basic Practice of Statistics - 3rd Edition Chapter 21 1 BPS - 5th Ed. Chapter 23 1 Chapter 23 Inference for Regression BPS - 5th Ed. Chapter 23 2 Objective : To quantify the linear relationship between an explanatory variable (x) and response variable (y). We can then predict the average response for all subjects with a given value of the explanatory variable. Linear Regression (from Chapter 5) BPS - 5th Ed. Chapter 23 3 Case Study Researchers explored the crying of infants four to ten days old and their IQ test scores at age three to determine if more crying was a sign of higher IQ Crying and IQ Karelitz, S. et al., “Relation of crying activity in early infancy to speech and intellectual development at age three years,” Child Development, 35 (1964), pp. 769-777. BPS - 5th Ed. Chapter 23 4 Case Study Crying and IQ Data collection Data collected on 38 infants Snap of rubber band on foot caused infants to cry recorded the number of peaks in the most active 20 seconds of crying (explanatory variable x) Measured IQ score at age three years using the Stanford-Binet IQ test (response variable y) BPS - 5th Ed. Chapter 23 5 Case Study Crying and IQ Data TABLE 23.1 BPS - 5th Ed. Chapter 23 6 Case Study Crying and IQ Data analysis Scatterplot of y vs. x shows a moderate positive linear relationship, with no extreme outliers or potential influential observations

Transcript of Case Study - Math - The University of Utahfiras/1070/Chapter_23.pdf · TABLE 23.1 BPS - 5th Ed....

Basic Practice of Statistics - 3rd Edition

Chapter 21 1

BPS - 5th Ed. Chapter 23 1

Chapter 23

Inference for Regression

BPS - 5th Ed. Chapter 23 2

 Objective: To quantify the linear relationship between an explanatory variable (x) and response variable (y).

 We can then predict the average response for all subjects with a given value of the explanatory variable.

Linear Regression (from Chapter 5)

BPS - 5th Ed. Chapter 23 3

Case Study

Researchers explored the crying of infants four to ten days old and their IQ test scores at age three to determine if

more crying was a sign of higher IQ

Crying and IQ

Karelitz, S. et al., “Relation of crying activity in early infancy to speech and intellectual development at age three years,”

Child Development, 35 (1964), pp. 769-777.

BPS - 5th Ed. Chapter 23 4

Case Study Crying and IQ Data collection

 Data collected on 38 infants  Snap of rubber band on foot caused infants

to cry –  recorded the number of peaks in the most active 20

seconds of crying (explanatory variable x)

 Measured IQ score at age three years using the Stanford-Binet IQ test (response variable y)

BPS - 5th Ed. Chapter 23 5

Case Study Crying and IQ

Data TABLE 23.1

BPS - 5th Ed. Chapter 23 6

Case Study Crying and IQ Data analysis

Scatterplot of y vs. x shows a moderate positive linear relationship, with no extreme outliers or potential influential observations

Basic Practice of Statistics - 3rd Edition

Chapter 21 2

BPS - 5th Ed. Chapter 23 7

Case Study Crying and IQ Data analysis

 Correlation between crying and IQ is r = 0.455 (from formula in Chapter 4)

 Least-squares regression line for predicting IQ from crying is

(as in Ch. 5)  R2 = 0.207, so 21% of the variation in IQ scores

is explained by crying intensity

BPS - 5th Ed. Chapter 23 8

 We now want to extend our analysis to include inferences on various components involved in the regression analysis – slope – intercept – correlation – predictions

Inference

BPS - 5th Ed. Chapter 23 9

 Conditions required for inference about regression (have n observations on an explanatory variable x and a response variable y) 1. for any fixed value of x, the response y varies

according to a Normal distribution. Repeated responses y are independent of each other.

2. the mean response µy has a straight-line relationship with x: µy = α + βx . The slope β and intercept α are unknown parameters.

3. the standard deviation of y (call it σ) is the same for all values of x. The value of σ is unknown.

Regression Model, Assumptions

BPS - 5th Ed. Chapter 23 10

  the regression model has three parameters: α, β, and σ

  the true regression line µy = α + βx says that the mean response µy moves along a straight line as x changes (we cannot observe the true regression line; instead we observe y for various values of x)

 observed values of y vary about their means µy according to a Normal distribution (if we take many y observations at a fixed value of x, the Normal pattern will appear for these y values)

Regression Model, Assumptions

BPS - 5th Ed. Chapter 23 11

  the standard deviation σ is the same for all values of x, meaning the Normal distributions for y have the same spread at each value of x

Regression Model, Assumptions

BPS - 5th Ed. Chapter 23 12

When using the least-squares regression line , the slope b is an unbiased estimator of the true slope β, and the intercept a is an unbiased estimator of the true intercept α

Estimating Parameters: Slope and Intercept

Basic Practice of Statistics - 3rd Edition

Chapter 21 3

BPS - 5th Ed. Chapter 23 13

  the standard deviation σ describes the variability of the response y about the true regression line

 a residual is the difference between an observed value of y and the value predicted by the least-squares regression line:

  the standard deviation σ is estimated with a sample standard deviation of the residuals (this is a standard error since it is estimated from data)

Estimating Parameters: Standard Deviation

BPS - 5th Ed. Chapter 23 14

The regression standard error is the square root of the sum of squared residuals divided by their degrees of freedom (n-2):

Estimating Parameters: Standard Deviation

BPS - 5th Ed. Chapter 23 15

Case Study Crying and IQ

 Since , b = 1.493 is an unbiased estimator of the true slope β, and a = 91.27 is an unbiased estimator of the true intercept α –  because the slope b = 1.493, we estimate that

on the average IQ is about 1.5 points higher for each added crying peak.

 The regression standard error is s = 17.50 –  see pages 600-601 in the text for this calculation

BPS - 5th Ed. Chapter 23 16

 The most common hypothesis to test regarding the slope is that it is zero: H0: β = 0 – says regression line is horizontal (the mean of

y does not change with x) – no true linear relationship between x and y –  the straight-line dependence on x is of no value

for predicting y  Standardize b to get a t test statistic:

Hypothesis Tests for Slope (test for no linear relationship)

BPS - 5th Ed. Chapter 23 17

Hypothesis Tests for Slope

 the standard error of b is a multiple of the regression standard error:

 Test statistic for H0: β = 0 :

–  follows t distribution with df = n-2

BPS - 5th Ed. Chapter 23 18

Hypothesis Tests for Slope

 P-value: [for T ~ t(n-2) distribution]

Ha: β > 0 : P-value = P(T ≥ t)

Ha: β < 0 : P-value = P(T ≤ t)

Ha: β ≠ 0 : P-value = 2×P(T ≥ |t|)

Basic Practice of Statistics - 3rd Edition

Chapter 21 4

BPS - 5th Ed. Chapter 23 19

Case Study Crying and IQ

Hypothesis Test for slope β

P-value

t = b / SEb = 1.4929 / 0.4870 = 3.07

Significant linear relationship

BPS - 5th Ed. Chapter 23 20

 The correlation between x and y is closely related to the slope (for both the population and the observed data) –  in particular, the correlation is 0 exactly when

the slope is 0  Therefore, testing H0: β = 0 is equivalent to

testing that there is no correlation between x and y in the population from which the data were drawn

Test for Correlation

BPS - 5th Ed. Chapter 23 21

 The t-score simplifies to:

 Degrees of freedom: n-2

Test for Correlation

BPS - 5th Ed. Chapter 23 22

 There does exist a test for correlation that does not require a regression analysis – Table E on page 695 of the text gives critical

values and upper tail probabilities for the sample correlation r under the null hypothesis that the correlation is 0 in the population   look up n and r in the table (if r is negative, look up

its positive value), and read off the associated probability from the top margin of the table to obtain the P-value just as is done for the t table (Table C)

Test for Correlation

BPS - 5th Ed. Chapter 23 23

Case Study Crying and IQ

Test for H0: correlation = 0  Correlation between crying and IQ is r = 0.455  Sample size is n=38  From Table E: for Ha: correlation > 0 , the

P-value is between .001 and .0025 (using n=40) – P-value for two-sided test is between .002 and .005

(matches two-sided P-value for test on slope) – one-sided P-value would be between .005 and .01 if

we were very conservative and used n=30

BPS - 5th Ed. Chapter 23 24

 A level C confidence interval for the true slope β is b ± t* SEb –  t* is the critical value for the t distribution with

df = n-2 degrees of freedom that has area (1-C)/2 to the right of it

–  recall, the standard error of b is a multiple of the regression standard error:

Confidence Interval for Slope

Basic Practice of Statistics - 3rd Edition

Chapter 21 5

BPS - 5th Ed. Chapter 23 25

Case Study Crying and IQ

b=1.4929, SEb = 0.4870, df = n-2 = 38-2 = 36 (df = 36 is not in Table C, so use next smaller df = 30) For a 95% C.I., (1-C)/2 = .025, and t* = 2.042

So a 95% C.I. for the true slope β is: b ± t* SEb = 1.4929 ± 2.042(0.4870) = 1.4929 ± 0.9944 = 0.4985 to 2.4873

Confidence interval for slope β

BPS - 5th Ed. Chapter 23 26

 Once a regression line is fit to the data, it is useful to obtain a prediction of the response for a particular value of the explanatory variable ( x* ); this is done by substituting the value of x* into the equation of the line ( ) for x in order to calculate the predicted value

 We now present confidence intervals that describe how accurate this prediction is

Inference about Prediction

BPS - 5th Ed. Chapter 23 27

 There are two types of predictions – predicting the mean response of all subjects

with a certain value x* of the explanatory variable

– predicting the individual response for one subject with a certain value x* of the explanatory variable

 Predicted values ( ) are the same for each case, but the margin of error is different

Inference about Prediction

BPS - 5th Ed. Chapter 23 28

 To estimate the mean response µy, use an ordinary confidence interval for the parameter µy = α + βx* – µy is the mean of responses y when x = x* – 95% confidence interval: in repeated samples

of n observations, 95% of the confidence intervals calculated (at x*) from these samples will contain the true value of µy at x*

Inference about Prediction

BPS - 5th Ed. Chapter 23 29

 To estimate an individual response y, use a prediction interval – estimates a single random response y rather

than a parameter like µy – 95% prediction interval: take an observation

on y for each of the n values of x in the original data, then take one more observation y at x = x*; the prediction interval from the n observations will cover the one more y in 95% of all repetitions

Inference about Prediction

BPS - 5th Ed. Chapter 23 30

Inference about Prediction

Basic Practice of Statistics - 3rd Edition

Chapter 21 6

BPS - 5th Ed. Chapter 23 31

 Both confidence interval and prediction interval have the same form.

– both t* values have df = n-2 –  the standard errors (SE) differ for the two

intervals (formulas on previous slide)   the prediction interval is wider than the

confidence interval

Inference about Prediction

BPS - 5th Ed. Chapter 23 32

Residual Plots x = number of beers y = blood alcohol

Roughly linear relationship; spread is even across entire data range (‘random’ scatter about zero)

Residuals: -2 731 -1 871 -0 91 0 5578 1 1 2 39 3 (4|1 = .041) 4 1

(close to Normal)

BPS - 5th Ed. Chapter 23 33

Residual Plots ‘x’ = collection of explanatory variables, y = salary of player

Standard deviation is not constant everywhere (more variation among players with higher salaries)

BPS - 5th Ed. Chapter 23 34

Residual Plots x = number of years, y = logarithm of salary of player

A clear curved pattern – relationship is not linear

BPS - 5th Ed. Chapter 23 35

 Independent observations – no repeated observations on the same

individual

 True relationship is linear –  look at scatterplot to check overall pattern – plot of residuals against x magnifies any

unusual pattern (should see ‘random’ scatter about zero)

Checking Assumptions

BPS - 5th Ed. Chapter 23 36

 Constant standard deviation σ of the response at all x values – scatterplot: spread of data points about the

regression line should be similar over the entire range of the data

– easier to see with a plot of residuals against x, with a horizontal line drawn at zero (should see ‘random’ scatter about zero) (or plot residuals against for linear regr.)

Checking Assumptions

Basic Practice of Statistics - 3rd Edition

Chapter 21 7

BPS - 5th Ed. Chapter 23 37

 Response y varies Normally about the true regression line –  residuals estimate the deviations of the

response from the true regression line, so they should follow a Normal distribution   make histogram or stemplot of the residuals

and check for clear skewness or other departures from Normality

– numerous methods for carefully checking Normality exists (talk to a statistician!)

Checking Assumptions