Biochemistry Chapter 3. Water Section 2.3 Structure of Water Most abundant molecule Held together...

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Biochemistry Chapter 3

Transcript of Biochemistry Chapter 3. Water Section 2.3 Structure of Water Most abundant molecule Held together...

Page 2: Biochemistry Chapter 3. Water Section 2.3 Structure of Water  Most abundant molecule  Held together by covalent bonds  2 atoms of H, 1 atom of O.

Water

Section 2.3

Page 3: Biochemistry Chapter 3. Water Section 2.3 Structure of Water  Most abundant molecule  Held together by covalent bonds  2 atoms of H, 1 atom of O.

Structure of Water

Most abundant molecule Held together by covalent bonds 2 atoms of H, 1 atom of O

Page 4: Biochemistry Chapter 3. Water Section 2.3 Structure of Water  Most abundant molecule  Held together by covalent bonds  2 atoms of H, 1 atom of O.

Water is a Polar Molecule

Definition: a molecule with an uneven distribution of charge but a net charge of zero

Water bonds at an angle

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Water’s ability to dissolve

“Like Dissolves Like”

Polar substances can dissolve polar substances, nonpolar substances can dissolve nonpolar substances

“Universal solvent”

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Questions:

Why don’t oil and water mix?

Why can water dissolve sugar or salt?

How does water dissolve a polar substance?

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Answer:

The + end of water attracts to the – ion of the substance

The – end of water attracts to the + ion of the substance

This breaks the ionic bond of the substance thus dissolving it

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Water’s special properties:

Due to H-bonds:1. Water can cling to itself and other

substances

2. Water is able to absorb large amounts of energy without changing temperatures quickly

(high boiling point)

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Capillarity:

Definition: cohesion and adhesion working together to move water molecules up a narrow tube against the force of gravity

Page 14: Biochemistry Chapter 3. Water Section 2.3 Structure of Water  Most abundant molecule  Held together by covalent bonds  2 atoms of H, 1 atom of O.

Homeostasis?

1. The H-bonds in water are the first bonds to break when an increase in energy (temp) is applied

2. It takes a LARGE amount of energy to break/move water molecules

3. Thus, the temperature of water stays fairly constant in a cell even though there might be a drastic temperature change outside

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Carbon Compounds

SECTION 3.1

Page 17: Biochemistry Chapter 3. Water Section 2.3 Structure of Water  Most abundant molecule  Held together by covalent bonds  2 atoms of H, 1 atom of O.

Organic Compounds

Organic compounds contain carbon atoms

Form covalent bonds with other C atoms or to other elements - N, H, and O.

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Carbon Bonding

C readily covalently bonds (a bond forms when electrons are shared)

Each C forms 4 covalent bonds

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Large Carbon Molecules

Polymers are made up of many small, repeating molecules called monomers.

Macromolecules- large polymers

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Condensation Reaction A chemical reaction that links

monomers to form polymers One water molecule is produced A.k.a. dehydration synthesis

Ex) Glucose and Fructose combine to make Sucrose, table sugar

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Condensation Reaction:

The formation of larger molecules by removing a H+ from one monomer and a OH- from the other monomer.

The H+ and the OH- combine to form the bi-product H2O.

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Hydrolysis

A chemical reaction that breaks down polymers

Reversal of condensation reaction

Usually done by adding water

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ATP – Adenosine Triphosphate

All of life’s functions require energy Energy compounds found in cells

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Biochemistry

The stuff life is made of!

Section 3.3

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The Four Molecules of Life

1. Carbohydrates 2. Proteins 3. Lipids 4. Nucleic Acids

All of your body is made up of these four types of molecules!

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The Building Blocks

Each type of molecules is made up of smaller parts called monomers.

When 3 or more monomers are linked together, they form a polymer.

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How to make a macromolecule.

How do you make a polymer from many monomers?

CONDENSATION REACTION!

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What will break up a large molecule?

The opposite reaction of condensation……

HYDROLYSIS REACTION!

The use of water to break apart polymers back into monomers.

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Monomers of the 4 Life Molecules

1. Carbohydrates - Monosaccharide 2. Proteins – Amino Acids 3. Lipids – Fatty Acids 4. Nucleic Acids - Nucleotides

How do you make macromolecules of each monomer?

CONDENSATION REACTION

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1. Carbohydrates Used for “fuel” and structural material Monosaccharide = monomer, simple

sugar, ex) fructose, galactose, & glucose C6H12O6

Disaccharide = 2 monomers, double sugarex) sucrose (table sugar)

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________________________________________

Examples)

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Polysaccharide = too many to countex) starch & cellulose (in plants)

glycogen (in animals)

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2. Protein Amino Acid = monomer, 20

different types

Peptide bond holds amino acids together

Polypeptide = chains of amino acids Protein = the final functional form, 1

or more polypeptides

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Most DIVERSE group of molecules:• structures such as antibodies, hormones, muscles,

skin, hair, and biological catalysts (enzymes) are made of proteins.

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Enzymes Protein molecules that catalyze

(increase the rate of) biochemical reactions

How Do Enzymes Work? Animation: How Enzymes Work

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3. Lipids

Fatty Acids = monomer

• Hydrophilic carboxyl head - polar

• Hydrophobic fatty acid tail – nonpolar, not soluble in water

Ex) saturated (solid) and unsaturated (liquid)

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Complex Lipids Triglycerides (fats)

Ex) butter Phospholipids

Ex) cell membrane Waxes

Ex) earwax Steroids

Ex) testosterone, cholesterol

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4. Nucleic Acids

Nucleotide = monomer

Found in the genetic material DNA & RNA

carries out all of the functions of the cell