AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics?...
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Transcript of AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics?...
![Page 1: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/1.jpg)
AD Lab
Andrews-Dalkilic
Data Exploration
![Page 2: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/2.jpg)
AD Lab
Outline
Architecture
What is Bioinformatics?
Explore some bioinformatics problems and tools
Talk about what’s in store for us
![Page 3: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/3.jpg)
AD Lab
Architecture
KnowledgeBase
RULES
Working MemoryFACTS
Explanation KnowledgeAcquisition
INFERENCEENGINE
AGENDA
UI
![Page 4: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/4.jpg)
AD Lab
Architecture
KnowledgeAcquisition
A (semi)automatic way to add domain knowledge (rules) without having to be a programmer
We can create rules—but virtually no facility to explain how and why.
![Page 5: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/5.jpg)
AD Lab
Architecture
FactoidsRule-based Systems
Rules
Post ProductionEfficient Pattern
Matching
Inference Engine
RHS Execution
Conflict ResolutionMarkov
ReteBayesian
![Page 6: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/6.jpg)
AD Lab
Architecture
Post Production
![Page 7: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/7.jpg)
AD Lab
Architecture
Premises (facts)
Axiomization & Inference Rules • build• tear apart
Bertrand Russell said, ``The point of philosophy is to start with something so simple as not to seem worth stating, and to end with something so paradoxical that no one will believe it.''
![Page 8: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/8.jpg)
AD Lab
Architecture
Premises (facts)
Questions:Are these facts consistent? existing systems
Is this model consistent with the data?existing systems
![Page 9: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/9.jpg)
AD Lab
Architecture
Axiomization & Rules• build• tear apart
Axiomization is meta-language over the facts
Any new facts are consistent with existing factsNo “new” facts can be found…
![Page 10: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/10.jpg)
AD Lab
Architecture
Premises (facts)
Axiomization & Inference Rules
Querying (with a new [partial] fact)What in my database makes my fact true?
What is known about my fact?
![Page 11: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/11.jpg)
AD Lab
![Page 12: AD Lab Andrews-Dalkilic Data Exploration. AD Lab Outline Architecture What is Bioinformatics? Explore some bioinformatics problems and tools Talk about.](https://reader035.fdocuments.us/reader035/viewer/2022062600/5a4d1b927f8b9ab0599c1cb1/html5/thumbnails/12.jpg)
AD Lab
Bon Voyage
Summary1st pass—deduction (simple)2nd pass—fuzzy 3rd Bayesian belief network