Abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is...
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Transcript of Abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is...
- Slide 1
- abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is currently supported by funding from AHRQ, grant number R01HS018494
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- Abstract screening an unpleasant necessity
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- abstrackr makes life easier! 1 upload citations PMIDs, RefMan XML, RIS, tab-delimited files 2 invite collaborators 3 screen abstrackr handles allocation and prioritizes screening citations likely to be relevant 4 export screening decisions
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- But wait, theres more! single- or double-screening all labels are exported; you can see who screened which abstracts resolve conflicts (if screeners disagree) see how many unscreened abstracts are likely to be relevant add notes about studies and/or tags to them
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- words of interest make screening decision tags
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- unstructured and structured (PICO) note-taking
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- A few words on semi-automating screening via machine learning
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- Semi-Automating Abstract Screening via Supervised Machine Learning abstracts from PubMed search doctor conducting review manually screened abstracts SVM
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- Results (Updating Reviews) We can achieve 100% recall while substantially reducing workload
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- And now a brief demo http://abstrackr.tuftscaes.org [1] http://abstrackr.tuftscaes.org code @ http://github.com/bwallace/abstrackr-web/http://github.com/bwallace/abstrackr-web/ [email protected] [1] the url will change to Brown soon, but well re-direct