Abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is...

download Abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is currently supported by funding from AHRQ, grant number.

If you can't read please download the document

Transcript of Abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is...

  • Slide 1
  • abstrackr open-source, web-based software for (semi-automated?!) abstract-screening This project is currently supported by funding from AHRQ, grant number R01HS018494
  • Slide 2
  • Abstract screening an unpleasant necessity
  • Slide 3
  • abstrackr makes life easier! 1 upload citations PMIDs, RefMan XML, RIS, tab-delimited files 2 invite collaborators 3 screen abstrackr handles allocation and prioritizes screening citations likely to be relevant 4 export screening decisions
  • Slide 4
  • But wait, theres more! single- or double-screening all labels are exported; you can see who screened which abstracts resolve conflicts (if screeners disagree) see how many unscreened abstracts are likely to be relevant add notes about studies and/or tags to them
  • Slide 5
  • Slide 6
  • words of interest make screening decision tags
  • Slide 7
  • unstructured and structured (PICO) note-taking
  • Slide 8
  • A few words on semi-automating screening via machine learning
  • Slide 9
  • Slide 10
  • Semi-Automating Abstract Screening via Supervised Machine Learning abstracts from PubMed search doctor conducting review manually screened abstracts SVM
  • Slide 11
  • Results (Updating Reviews) We can achieve 100% recall while substantially reducing workload
  • Slide 12
  • Slide 13
  • And now a brief demo http://abstrackr.tuftscaes.org [1] http://abstrackr.tuftscaes.org code @ http://github.com/bwallace/abstrackr-web/http://github.com/bwallace/abstrackr-web/ [email protected] [1] the url will change to Brown soon, but well re-direct