A database for the GMOchips-project
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Transcript of A database for the GMOchips-project
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
A database for the GMOchips-project
Jakob [email protected]
Agency BATS, Switzerland
GMOchips kick-off meeting Brussels 2001
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Overview
•BATS-Report 2/97 of Wolfram Hemmer
•DMIF-GEN database on GM foods
•BATS-BAG database on future GM crops
•Database (DB) development steps
•DB-requirements in the GMOchips-project
•Goals for the Website GMOchips.org
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Goals of the DMIF-GEN database
• Administration and dissemination of the project results (detection methods)
• Administration of the PCR-parameters and primers developed in the project
• Information about approved GMOs
• Accessible for the public (through WWW)
• Technology: Inprise Interbase and Java
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Relationships of the DMIF-GEN DB
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Relationships of the DMIF-GEN DB
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Interface of the DMIF-GEN database
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Usage of the DMIF-GEN database:A query over a number of tables
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Goals of the BATS-BAG database
• Internal knowledge base for the SFOPH
• Focus on petition infos of new GMOs (few sequences and no PCR-informations)
• Focus on future GMO-products on the Swiss market
• Contacts for GMOs (authorities & industry)
• Not primarily available for the public
• Technology: MS Access 2000
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Browser-interface of the BATS-BAG DB
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Questions for the DB-development
• Data sources
• Format of the introduced data
• Filters and controls for data entry
• Concept about maintenance
• Access restrictions to the database
• Distribution channels (WWW, publications)
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
8 steps of database-development
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
DB-requirements for GMOchips
• Management of sequence data
• Storage of PCR-parameters & primers
• Administration of Genetic elements (plasmids, promotors, terminators, …)
• Matching with corresponding petition- and industry information
• Accessibility through Internet (WWW)
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
Goals of the Website GMOchips.org
• General project information for the public
• Survey forms to collect DB requirements
• Password-protected platform for document and software-exchange
• Documentation & download of DB-versions
• Internal agenda, meeting infos & addresses
• Mailing-list archive
• Dissemination of results at projets end
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A database for the GMOchips-project GMOchips Kick-off meeting [email protected]
The project-website GMOchips.org
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A database for the GMOchips-project GMOchips Kick-off meeting [email protected]
The project-website GMOchips.org
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A database for the GMOchips-project GMOchips Kick-off meeting [email protected]
The project-website GMOchips.org
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[email protected] A database for the GMOchips-project GMOchips Kick-off meeting 2001
All slides are available on the Internet:
www.GMOchips.org/docs/kickoff