12-3-08 Investor Presentation (Final)

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    Athersys,Inc.

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    Thestatementsanddiscussionscontainedinthispresentationthatarenothistoricalfactsconstitute

    forwardlooking

    statements,

    which

    can

    be

    identified

    by

    the

    use

    of

    forward

    looking

    words

    such

    as

    believes, expects, may, intends, anticipates, plans, estimates andanalogousorsimilar

    expressionsintendedtoidentifyforwardlookingstatements.Theseforwardlookingstatementsand

    estimatesastofutureperformance,estimatesastofuturevaluationsandotherstatementscontained

    hereinregardingmattersthatarenothistoricalfacts,areonly predictions,andthatactualeventsor

    results

    may

    differ

    materially.

    We

    cannot

    assure

    or

    guarantee

    you that

    any

    future

    results

    described

    in

    thispresentationwillbeachieved,andactualresultscouldvarymateriallyfromthosereflectedinsuch

    forwardlookingstatements.

    Information contained in this presentation has been compiled from sources believed to be credible

    and reliable. However, we cannot guarantee such credibility and reliability. The forecasts and

    projectionsof

    events

    contained

    herein

    are

    based

    upon

    subjective valuations,

    analyses

    and

    personal

    opinions.

    This presentation shall not constitute an offer to sell or the solicitation of an offer to buy any

    securities. Such an offer or solicitation, if made, will only be made pursuant to an offering

    memorandumanddefinitivesubscriptiondocuments.

    ForwardLookingStatements

    2

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    CompanyHighlights

    Focusonbiologics(MultiStem )andpharmaceuticals(forCNS/metabolic

    relatedindicationsincludingobesity,cognitionandothers)

    HighlystandardizedOfftheshelf celltherapyproduct,producedatscale

    Administeredwithouttissuematchingorimmunesuppression

    Multiplediseaseindicationsindevelopment multiplemechanismsofbenefit

    Frost&SullivanProductInnovationoftheYearAward 10/29/08

    NASDAQ:ATHX

    $65MMfinancingcompletedinJune07

    Emergingclinicalportfolioofbestinclass productcandidatesandtechnologies

    Multipleclinicalstageprogramsindevelopment,strongpreclinicalpipeline

    MultipleclinicaltrialsinitiatedwithMultiStem

    Publiccompanywithstrongcashposition

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    BusinessStrategy

    Maintainleanoperationalinfrastructure/modestcoreburn

    Costeffective

    portfolio

    diversification

    +focused

    core

    competencies

    Reducesriskanddevelopmentcost

    Leverageprior

    knowledge,

    validation,

    development

    efforts

    of

    others

    to

    produceabetter,saferand/ormoreconvenientproduct

    Multiplepotentialadvantagestobeingbestbutnotfirst incertainareas(but

    alsoleveragingearlymover opportunityinareaswhereitmakessense)

    Advanceprogramsasresourcesallow

    Evaluatepartneringopportunitiesasweadvance

    Developaportfolioofpotentialofpotentialbestinclassopportunities

    UsingaFastFollower strategyinmultipleareas,EarlyMover inothers

    Portfoliobasedapproachenablesdevelopment&partneringflexibility

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    ObesityProgram

    5

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    ObesityMarketOpportunity

    ClinicalLandscape

    TherapeuticLandscape

    Growing,globalhealthepidemiccontributingtoheartdisease, diabetes,cancerandstroke

    Estimated30%ofAmericansareclinicallyobese(BMI> 30);anadditional~30%areoverweight(BMI> 25)

    EconomiccostinU.S.aloneisestimatedat$117billionannually

    Trueblockbusterpotentialforsafeandeffectivetherapies

    Increasingrecognitionofobesityasseriousmedicalcondition

    Nohighlyeffective&safedrugtherapiescurrentlyonmarket fewinclinicaltrials,recent

    additionalattrition

    due

    to

    demise of

    CB

    1antagonist

    class

    Severaltargetsarewellknownbuthavenotbeeneffectivelyexploitedtodate

    Largepotentialmarket,patientvariability(efficacyandtolerability)createsroomfor

    multipleplayersandMOAs

    6

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    ObesityProgram Overviewof5HT2cAgonists

    5HT2c(serotonin)receptoragonistssuppressappetite&causeweightloss

    Portfolioofpotentandselectivecompoundsestablished

    Mechanismextensivelyvalidatedinhumans(e.g.fenfluramine,dexfenfluramine

    recognizedashighlyeffectiveweightlossagents)but

    Thesenon

    selective

    agents

    also

    activate

    the

    5HT2b

    receptor

    in

    the

    heart

    and

    cause

    cardiovasculartoxicity(valvular hypertrophy=valvular regurgitation/heartmurmur)

    Selective5HT2cagonists(i.e.thatdonotstimulate5HT2b)believedtobesafe

    Selectivityrelativeto5HT2aimportanttolimitingCNSrelated sideeffects

    ATHX105hasbeenthelead

    MultiplePhaseItrialscompletedinU.K.(goodsafety&tolerabilityprofileobserved)

    Excellentregionalabsorptionseeninrecentclinicalstudy(importantfordevelopmentof

    modifiedreleaseformulation)

    Currentlyonpartialclinicalhold havemetwithFDA,resolvedseveralissues,but

    significantissueremains couldresultinsuspensionorterminationoffurtherdevelopment

    Intendtoprovidefurtherupdateonprogramthisquarterafter completionofongoing

    work,analysisofresultsanddialoguewithFDA

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    Cognition&Wakefulness H3AntagonistProgram

    HistamineH3ReceptorExtensivelyStudied MultiplePotentialApplications

    Highqualityportfoliooftherapeuticcompoundsestablished

    H3

    Receptor

    Antagonists

    /

    Inverse

    Agonists

    result

    in

    elevated

    levels

    of

    histamine

    in

    certainregionsofthebraindirectlyaffectingcognitivetone

    Compoundsimprovewakefulness(e.g.Narcolepsy,EDS)andcognition(e.g.ADHD,

    Alzheimers)

    Mayalso

    have

    relevance

    in

    other

    indications

    (e.g.

    obesity,

    neuropathic

    pain)

    Multiplecompoundscurrentlyunderevaluationinanimaltox,efficacystudies

    Potent,highlyselectivecompoundsdevelopedbyATHX

    Intendtoselectaclinicalcandidateandoneormorebackupcompoundsthis

    quarter(pendingsuccessfulcompletionofongoingstudies)

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    MultiStem:Biologic

    ProductPlatform

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    HistoricalLimitationstoStemCellTherapy

    RequirementforcloseDonor Recipienttissuematching

    Safety

    Necessarytoavoidtransplantrejection

    AlsoneededtoreduceincidenceofGraftvs.HostDisease

    Onedonorforeachrecipient logisticallydifficultandverycostly

    Biologicallimitationsofmostcellspreventlargescaleproduction

    Mostcell

    types

    can

    produce

    limited

    repertoire

    of

    more

    differentiated

    cells

    Goalhasbeentoreplacelostordamagedcells(e.g.HSCtransplantation)

    Rejection,GVHD,EctopicTissue,Teratoma /Tumorformation

    Mechanisticfocushasbeenprimarilycell/tissuereplacement

    Lackofabilitytoscaleproductionofcells

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    November2008 PfizerannounceslaunchofReGenerative Medicine

    Centers

    $100million

    program

    to

    develop

    therapies,

    focused

    in

    Cambridge

    UK

    (brain

    /sensory)andCambridgeMA(heartdisease/diabetes)

    November2008 Genzyme andOsirisannouncepartnershipto

    commercializeProchymal andChondrogen (MSC)

    $130million

    upfront,

    $1.25

    billion

    in

    potential

    milestones

    OsiristocommercializeinU.S.;Genzyme inRoW

    July2008 GSKannouncescollaborationwithHarvardStemCell

    Institute

    $25millionresearchpartnership

    June2008 PfizerannouncesinvestmentinEyeCyte

    Treatmentofeyediseases(e.g.,diabetesretinopathy)withadultstemcell(EPC)

    2008 PharmaBiotechArrivingtoParty

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    MultiStem: BestinClassCellTherapyProduct

    Offtheshelf administration

    LeadingIPpositionforpluripotent,multifunctionalnonembryonicstemcells

    Notissuematchingneeded

    Non

    immunogenic

    No

    immunosuppression required

    Bankedproduct,highlycharacterized

    Largescaleproduction/yield(100kstomillionsofdosespossiblefromasingledonor)

    Dynamicallyresponsivebiologictherapy=adrugliketherapy

    Therapeuticeffectprimarilyfactormediated:antiinflammatory/immunomodulatory,

    cytoprotective,trophic &

    growth

    factors,

    angiogenic /

    vasculogenic

    Directcellreplacementplaysaminorrole

    Multiplepotentialmechanismsoftherapeuticbenefit

    Welldefined,FDAapprovedmanufacturingprocessinplace(withLonza)

    MultipleINDs advanced

    in

    efficient,

    cost

    effective

    manner 12

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    OverviewofMultiStem ProductionProcess

    LotRelease&ProductCharacterization

    Testing

    Sterility

    Potency

    PurityandViability

    StableCytogenetics

    Absenceoftumorigenic potentialinvivo

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    MultiStem:AdditionalSafetyStudies

    GLPToxicologyandClinicalPathology(2week,4week) Studiesindicatenoevidenceofacutetoxicityorabnormalclinicalpathology

    GeneticStability

    and

    Tumorigenicity Testing

    Karyotypic stability

    ClinicalproducttestedinstandardNudemousetumormodels(bothi.v.ands.c.)

    LongTermGLPHistopathologyAnalysis(oneyearforstroke) Extensive

    histopathology

    analysis

    of

    animals

    receiving

    clinical

    grade

    MultiStem

    indicatesnoevidenceoftumorigenicity orectopictissueafteroneyear

    Nootherabnormalitiesorotheradverseeventsnoted

    ImmuneSensitizationAnalysis

    Singleor

    repeat

    administration

    (5x)

    of

    MultiStem does

    not

    cause

    immune

    sensitizationorabnormalclinicalpathology

    GeneExpression,ProteinExpressionandSNPArrayAnalysis Noevidenceofvariabilitybetweenworkingcellbanksandproductionrunsafter

    significantexpansion

    of

    clinical

    grade

    cellular

    product 14

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    MultiStem:MultiplePotentialMechanismsofBenefit

    OPEN Phase I Trial for HSC/BMT Support& GVHD Prophylaxis

    OPEN Phase I Trial for AMI

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    16

    FocusedProductDevelopmentApproach

    Treatment

    Acute/Ischemic

    Injury

    ImmuneSystem

    Modulation

    o AcuteMyocardialInfarction

    (Ph1initiated)

    o IschemicStroke

    o HSC/BoneMarrowTransplant Support/

    GVHD(Ph

    1initiated)

    o Chronicischemia/CHF

    o Peripheralvasculardisease

    o Traumaticbraininjury&related

    o OtherNeurological

    Indications

    o Otherischemicinjury(e.g.,kidney)

    o MultipleSclerosis

    o Diabetes(type1)

    o Transplantation

    o Inflammatorybowel

    disease

    o Otherautoimmune

    disorders

    MultiStem

    Otherthemes,e.g.,proteindeficiencies,

    bonegrowth

    Nextgeneration

    opportunities

    o OtherNeurologicalIndications

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    AcceleratingMultiStem ProofofConceptPath

    Proofofconceptwithcelltherapyproducts

    Standardizedandscalableproductmanufacturing

    Basicsafety inhumanswithindesireddoserangesanddeliveryapproaches

    PhaseIstudies

    (with

    potential

    for

    efficacy

    signals)

    Efficacyinhumans

    FocusinneartermonPhaseI/IIstudiesinindicationswithdiscreetendpoints/readoutsovershort showingofdesiredbiologicalactivityandbenefit

    Furtherelucidationofmechanismsofbenefit(fromanimalmodels,invitro)

    support

    clinicalfindings

    Fastestpathlikelyinfusedproductinimmunomodulatory area

    LeverageINDBB13507(EvaluationofMTDofSingleandRepeatedAdministrationofAllogeneic MultiStem inPatientswithAL,CMandMyelodysplasia)

    Treatmentof

    (steroid

    refractory,

    or

    acute)

    GvHD

    Basically,samepatientpopulationwithwelldefinedshortertermendpoints;samesites

    Otherimmunomodulation indication(s): exploitsametherapeuticpathways,andconditionswithsimilartreatmentapproaches

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    MultiStem for

    Acute

    MyocardialInfarction

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    MultiStem: AcuteMyocardialInfarction

    AMIremainsamajorareaofneedforimprovedtherapies

    INDapproved,clinicaltrialinitiatedwithcodevelopmentpartner(Angiotech)

    865,000heartattacksannuallyintheU.S.

    156,000deaths

    SignificantincidenceofprogressiontoCHF

    Reducesinflammationrelateddamageandpromotesrevascularization

    Alsoexploringadministrationviai.v.

    MultiStem demonstratedsafeandeffectiveinmultiplepreclinicalmodels

    Local(catheter)deliveryofMultiStem followingheartattack

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    InnovativeApproach:StandardizedProduct+EfficientLocalDelivery

    Standardizedproduct

    (administered

    without

    matching

    or

    immunosuppressive

    agents)

    Reducesinflammationrelateddamageandpromotesrevascularization

    Administrationof

    cell

    product

    into

    perivascular region

    Relativeeaseofuse,comparabletostandardangioplasty

    Athersys andpartner,

    Angiotech Pharmaceuticals

    ClevelandClinicFoundation,HenryFordHealthSystem,UniversityofMichigan&

    others

    Administrationofbonemarrowderived,allogeneic MultiStem cells topatients

    Targeted,localdeliveryincoronaryarterieswithtransarterial catheter

    Strongpartnersandleadinginvestigationalsites

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    Allogeneic MultiStem DeliversFunctionalImprovementinPig

    ModelsofCardiovascularIschemia

    ConsistentimprovementacrossmultiplefunctionalparameterswithsingledoseadministeredpostMI

    Noobservedsafetyissues

    20

    2530

    35

    40

    45

    50

    55

    60

    Baseline 1 Wk post-MI 4 Wk post MI

    Ejection

    Fraction

    %

    P-value < .02p-value < .005

    Transientischemia,catheterdelivery

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    Transarterial CatheterDeliveryApproach

    MercatorMedSystems,510(k)approvedMicroSyringe InfusionCatheter

    Sitespecificdeliveryintoperivascular spaceandadventitia

    Retaingreaternumberofcellsat/nearinjurysite(reducewashawayofcellsintobloodstream)

    Relativeeaseofuse

    Goodcellviability,efficienteaseofuse

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    Strategy

    Objectives

    PhaseIStudy,openlabel,doseescalation

    PhaseIClinicalProtocolSummary AMI

    STEMI,LVEFbetween3045%

    Administrationof

    MultiStem in

    coronary

    artery

    (via

    transarterial catheter)

    deliveredonday25afterAcuteMI

    Threedosegroups(6patientseach)plus10patientregistrycohort

    Multiplesites,largelyregional

    Primaryendpoints:safety (arrhythmias,acutetoxicity,hospitalization,death,

    mechanicalcomplication)

    Secondaryendpoints:functionalitymeasures(e.g.LVEF)

    Providesafetyfoundationandinformationtoenabledesignofmeaningful

    PhaseIIexploratorystudy(e.g.,doselevels,deliverytiming)

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    DeliveryofMultiStem inAMIpatient

    5sec 30

    sec 60

    sec

    Delivery, retention of cellsin area of ischemic damage

    Vessel patencyRapid, efficient procedureWell tolerated

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    MultiStem forSupport

    of

    HematologicalStemCellTransplants

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    MultiStem: Transplantation(GvHD)

    Frequent,potentiallylifethreateningconsequenceofHSC/BMtransplants

    INDapproved,clinicaltrialinitiated

    Clearneedforimprovedtreatmentsbeyondbroadimmunosuppression

    Limitedtreatmentoptionsforcomplications(e.g.,GvHD)

    Otherproblemsassociatedwithconditioningregimen(e.g.,GIfunction)

    ReductionofGvHD impactandpromotionoftissueregenerationandengraftment

    PotentialforGvHD intervention

    MultiStem demonstratedsafeandeffectiveinpreclinicalmodels

    IVdeliveryofMultiStem inconjunctionwithHSC/BMtransplant

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    MultiStem ImmunoPrivilegedInVitro

    Mixture

    Donor 1 Cells(Rare alloreactive T-

    cells in red)

    Mixed Lymphocyte Reaction

    Donor 2 Cells

    Recognition of allogeneic cellscauses T-cell activation and

    proliferation

    Proliferation measurable byincrease DNA synthesis Self to self

    Allogeneic T-cell controls

    T-cells dont reactto MultiStem (MAPC)

    MultiStem does not elicit In VitroT-Cell Response in MLR Studies

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    MultiStem Immunosuppress Alloreactive TCells

    MAPC(MultiStem)

    SuppressesImmune

    Response

    MultiStem (likeMSC)Exhibits

    ImmunosuppressiveEffectsOnMLR

    (human)

    0

    20,000

    40,000

    60,000

    80,000

    100,000

    120,000

    140,000

    160,000

    180,000

    R (Lewis)+ S (DA) R (Lewis) No responder or stimulator

    3H-thymidin

    ecounts

    None 0.03x10 5

    0.06x10 5 0.125x10 5

    0.25x10 5 0.5x10 5

    1x10 5 2x10 5

    DoseDependentSuppressionofAllogeneic TCell

    ResponseinMLR(Lewisrat)

    DoseDependent

    Effect

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    MultiStem ProvidesSurvivalAdvantageinRatAcuteGvHD Model

    Ratssublethally irradiated

    and

    injected

    withbonemarrowcellsandTcellsfromdifferentratstrain creatingGraftvs.Hostimmuneresponse

    MultiStem administeredI.V.atday1,

    orat

    days

    1and

    8

    MultiStem providessignificantsurvival

    benefitversus

    animals

    receiving

    no

    treatment

    BenefitsobservableforotherGvHDindicators(bodyweight,activity,posture,furtexture,skin)

    0%

    10%

    20%

    30%

    40%

    50%

    60%

    70%

    80%

    90%

    100%

    0 2 4 6 8 10 12 14 16 18 20 22 24 26 28 30 32 34

    Days

    Survival

    No treatment

    Treatment, day 1

    Treatment days 1+8

    Significant survival advantage in MultiStem treated animals

    Design

    Results

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    GutPathologyinRatAcuteGVHDModel

    GVHD,PBSControl

    Treated

    GVHD,MultiStem

    Treated

    Day15Pathology,MultitreatmentGroup

    Substantiallyless

    gastrointestinal

    damage

    inMultiStemtreated

    animals

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    Objectives

    Strategy

    PhaseIstudy,openlabel,doseescalation

    PhaseIClinicalProtocolSummary Transplantation/GvHD

    Patients(leukemia,myelodysplasia)undergoingPBSC/bonemarrowtransplantation

    Administrationof

    MultiStem intravenously

    Twotreatmentarms:Singledosecoadministeredwithtransplant,multipledoses

    administeredoverfirst30days

    Continualreassessmentmethodology

    Primaryendpoints:safety:maximumtolerateddosebasedoncompositeofDLTs and

    AEs through30days

    Secondaryendpoints:incidenceandseverityofGVHD,survival,infection

    Providesafetyfoundationtoallowfor(a)prophylactictreatmentandinterventionfor

    GVHD,and(b)singleandmultipledosetreatmentapproaches

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    Multipleindicationspossible

    Treatingemergentorchronicautoimmunedisease

    OpportunitiesinOtherAutoimmuneDisease

    Immunomodulatory activityofMultiStem forGVHDismechanisticallysimilar

    tobiological

    conditions

    for

    other

    autoimmune

    conditions

    Rapidclinicalentryispossible(leveragingoffofexistingpreclinicaland

    clinicaldata)

    Manufacturingcapabilityalreadyinplace

    Widerangeofautoimmuneconditionswithunmetmedicalneedaspotential

    therapeutictargetsforMultiStem

    I.V.delivery

    Otherpotentialbenefitstohelpaddresstissuedamage

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    MultiStem forIschemic

    Stroke

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    MultiStem: IschemicStroke

    SubstantialunmetneedinthetreatmentofIschemicStroke

    INDfilingplannedfor2H,2008

    Over700,000strokesannuallyinU.S.,and~80%+ischemicstrokes

    Substantialfunctionallossandrehabilitationandfollowupcarecosts

    Limitedtreatmentoptions,tPA mustbeadministeredwithin3 4.5hrsofstroke

    Broadpotentialtreatmentwindow

    Benefittrophicfactormediated:reduceinflammation,stimulaterevascularization,

    override processes of cell / tissue decline & contribute to tissue regeneration

    MultiStem demonstratedsafe

    and

    effective

    in

    pre

    clinical

    models

    IVdeliveryofMultiStem 48hours(+/)followingIschemicStroke

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    AnimalModelsofCerebralIschemia

    36

    MCA Occlusion

    MCA Ligation

    P Cli i l E i l A h

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    Experimentalapproach

    1. Immunosuppression (+/)withallo/

    xenogeneic cells,intracranialdelivery

    2. Routeof

    administration:

    viability

    of

    IV

    delivery

    3. Deliverywindow:17dayspoststroke

    4. Doseescalation

    PreClinicalExperimentalApproach

    37

    Keyresults

    Immunosuppression notrequiredforsafeimprovementtoneurological

    function

    Significantfunctionalimprovement(locomoter,neurological)statisticallyovercontrol

    Comparableimprovementinlocomotor orneurologicalfunctionobservedamonganimalsreceivingcellsat1,2or7

    days

    DoseresponseobservedwithIVinfusedcells,asmeasuredbyneurologicalimprovement

    Engraftedcellsdisplayneuronalmarkersinneonatalmodel

    Noabnormaltissuesorabnormalpathologyobservedin

    animalskept

    on

    study

    for

    1year

    post

    cell

    transplantation

    Single Dose of Human MultiStem Provides Robust Durable Improvement

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    SingleDoseofHumanMultiStem ProvidesRobust,DurableImprovement

    inRodentModelofIschemicStroke

    0.4 units

    1 units

    2 units

    4 units10 units

    20 units

    10 units non-viable cells (control)

    Dose response Therapeutic benefitproportional to dosedelivered

    Treatment timing

    Improvementwhether delivery atday 1, 2 or 7

    Bederson Composite Score of Neurological Function,IV-deliveryof MultiStem day 2 post-stroke

    Baseline

    Post-

    Stroke

    Day14

    Day28

    Day42

    Day56

    MeanNeu

    rologicalScore

    1.5

    2.5

    0

    0.5

    1

    2

    3

    38

    M ltiSt P Hi hli ht

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    MultiStem ProgramHighlights

    BroadMultiStem productplatformforcellbasedtherapyinitiatingclinicaltrials

    Potentialforbroaddevelopmentprogram

    Standardized,offtheshelfproduct(aproduct,notaprocedure)

    Firsttruly

    scalable

    manufacturing

    platform

    for

    cell

    therapy

    StrongIPposition

    Ischemicinjury:AMI(possiblyischemicstroke)

    Immunomodulation andtissuedamage:BoneMarrow/HSCTransplantation/GvHD

    Otherneurologicalindications,autoimmunedisease,otherareas

    Singlemasterfile approach=highlyefficientdevelopment

    Progresswillbebasedonvalidationinappropriatemodels,collaborationwithexperts

    2008Focus:Initiatingclinicaldevelopmentactivities

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    Financials&Milestones

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    Athersys Key Milestones

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    Athersys KeyMilestones

    BeginATHX105PhaseIstudy

    INDapprovalforMultiStem HSCtransplantsupport/GvHD

    INDapprovalforMultiStem AMI

    NASDAQlistingandshareregistration

    EvaluateH3antagonistcompoundsformultipleindications

    Review/evaluateATHX105PhaseItoplineresults

    SubmitATHX105PhaseIIplantoFDA

    CompleteadditionalATHX105clinicalstudiesre:safety,regionaldrugabsorption

    LaunchMultiStem GVHD/OncologySupportPhaseIclinicaltrial LaunchMultiStem AMIPhaseIclinicaltrial

    ResolvePartialClinicalHoldwithFDA

    CompletefurtherpreclinicalstudiesforH3antagonistprogram/selectcandidate

    INDApprovalforMultiStem Stroke(Initiatetrialdependingonresourceavailability)

    2007

    2008

    42

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    43/43

    Athersys,

    Inc.