10minutes Roger

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EOL Taxonomy Code Sprint Roger Espinosa University of Michigan September 8, 2008

Transcript of 10minutes Roger

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EOL Taxonomy Code Sprint

Roger EspinosaUniversity of Michigan

September 8, 2008

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BackgroundBiodiversity

Animal Diversity WebMousetrapQuaardvark

BioKIDS UM Natural History Museum Portal

Grades 5-8 Distance Learning International Poetry Guild (IPG) Earth Odysseys

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Drupal (circa 2004-2006)Mostly 4.x development

Organic Groups Taxonomy Access Flexinode Category Views

Started looking into 5 before switching technologies. Too much churn…

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Taxonomy Module Issues using taxonomy.module to manage taxonomy Synonyms Common names Ranks Authorship Taxonomy is unstable data

Distinction between identification and tagging Sequence Can identity to unknown names

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Managing TaxonomyADW taxonomy not based on any

single source Composite classification built from multiple

sources (Mammal Species of the World, Howard & Moore, ITIS)

Past: same database as managed was used in projects In theory, updates could be made public

faster Ancestry indexed as materialized paths

(best match for editing vs. search)

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Managing Taxonomy: FutureSource data managed separately, to

minimize duplication of data between classifications

Build composite classificationsExport composite classifications as

simpler hierarchies to import into other project databases

UUIDs to maintain consistency

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This week??