1 HUBzero Roadmap and Community Feedback George B. Adams III and Michael McLennan HUBzero Platform...
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Transcript of 1 HUBzero Roadmap and Community Feedback George B. Adams III and Michael McLennan HUBzero Platform...
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HUBzero Roadmap and Community Feedback
George B. Adams III and Michael McLennanHUBzero Platform for Scientific Collaboration
Purdue University
This work licensed underCreative Commons
See license online:by-nc-sa/3.0
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How is HUBzero developed?
1 Via sponsored research projects that are using hubs
thermalHUB.org: WikisGlobalHUB.org: Groups, blogs
IndianaCTSI.org: Federated identitypharmaHUB.org: Rappture builder
nees.org: Group data sharingcatalyzeCare.org: Exploring time-series data
ciHUB.org: Surveys, standardized tests
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How is HUBzero developed?
2 Via specific, funded development projects
Instant-On Computing for nanoHUB.org• $1.4M NSF ARRA award, Gerhard Klimeck (PI)• Execute jobs without waiting in a queue
Cornell MATLAB Cluster• $660k NSF ARRA award, David Lifka (PI)• Send MATLAB jobs to Cornell cluster
Pharmaceutical Engineering Pipeline• $1.9M NSF CDI award, Rex Reklaitis (PI)• Workflow system for Rappture-based models
Administrative Supplement for the CTSA• NIH award, Anantha Shekhar (PI)• IdM, Alfresco Share, i2iconnect.org
Advancing Digital Collections• $1.57M IMLS award, Emily Gore (PI)• Integrate Fedora/HUBzero via OAI-ORE
Recommendation System• $500k NSF IIS award, Luo Si (PI)• Recommendation engine for HUBzero content
Open Gateway Computing Environments• $1.5M NSF OCI award, Marlon Pierce (PI)• Open Social gadgets for HUBzero
Project Bamboo• Mellon Foundation Award• Bamboo “Work Space” in HUBzero
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How is HUBzero developed?
3 Via HUBzero Consortium activities and member institutions
Anurag ShankarHUBzero Community AdvocateIndiana University
Anna Alber Bruce Barton Noha Gaber Emily Gore Brenda Hudson Alisa Neeman
HUBzeroCommunityBoard
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How is HUBzero developed?
4 By all of you!
http://hubzero.org
Questions/Answers
Wishes/Comments
Bug Reports
Coming soon: Patch submission, Component Marketplace
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Wish Lists
153 Wishes entered
42 Granted
29 Granted since HUBbub 2010
http://hubzero.org/wishlist
http://nanohub.org/wishlist
203 Wishes entered
52 Granted
195 Wishes entered
42 Granted
http://nanohub.org/wishlistLeverage
From OtherProjects
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HUBzero 1.0 Release
More details: http://hubzero.org/release/v1
• User groups
• Wiki template pages and new wiki macros
• Blogs for personal profiles and groups
• Rappture builder/tester
• Support for MATLAB Parallel Toolbox job submission
• Direct Condor job submission
• Multiple, redundant job submission
• Access control layer for support tickets
• Completely new and improved search engine with plug-ins
• Code improvements for updated accessibility standards
• Security improvements
• Auto-completer for tags, members, groups
• Twitter feed module
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Data Tables: Ann Christine Catlin
nees.org
pharmaHUB.orgcceHUB.org
HUBzero is a publication platformfor simulation tools
Becoming a platform forcommunity databases
Connect The Two
Data Mining
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Advancing Digital Collections: Clemson
• Integration with data repository software• Integration with GIS data• Federated search via OAI-ORE
REDCap Integration: Indiana
• REDCap = “Research Data Capture” tool• Used widely in biomedical research community• 9,680 studies, 214 institutions
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Scientific Workflow: Pegasus
• Combine Rappture tools in Pegasus workflows• Integrate Pegasus into hub execution environment• Support parameter sweeps, optimizations
Instant-On Project: Purdue
• Cache simulation results• Instant access to common results• Connect to NICS/Kraken for computational cycles
Glide-Ins: Open Science Grid / NEES
• Condor Glide-ins to minimize queue wait times• Sustained computation for large workflows
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zoteroConnections to literature:• DOIs from DataCite Cons• COinS for Zotero
Improve Publication Process: Purdue
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Project Bamboo: Wisconsin/Indiana
• Build a Bamboo “Work Space” on top of HUBzero• Web services for accessing remote collections
Federated Identity Management
• IndianaCTSI.org supports: InCommon, OpenID• nanoHUB.org will add: Facebook, LinkedIn• Link multiple digital personas into your hub account• ssh key management
Underlying OS: Indiana, Clemson
• Install/test HUBzero on RedHat Enterprise Linux